Werner, S. L., Barken, D. & Hoffmann, A. Stimulus specificity of gene expression programs determined by temporal control of IKK activity. (nature.com)
(2017) Enhancer transcription reveals subtype - specific gene expression programs controlling breast cancer pathogenesis. (mdanderson.org)
To better visualize changes in gene expression programs during differentiation, we performed k - means clustering analysis, followed by hierarchical clustering, to group genes by their timing of induction or suppression during the normal ES cell differentiation process. (journals.plos.org)