Comparative genomics analyses with uncultivated environmental TM7 assemblies show remarkable conserved gene synteny and only minimal gene loss / gain that may have occurred as TM7x adapted to conditions within the human host.
Not exact matches
The
comparative genomics analysis could «backtrack» the history of their genes, and showed that the two bacteria have diverged 13.9 million years ago from a common ancestor
with a similar genome structure, and possibly a similar lifestyle.
Firstly, both species have well characterised genomes
with highly accurate and well annotated assemblies [5, 17] and have both been used frequently in
comparative genomic analyses resulting in many easily accessible pairwise alignment datasets available on the UCSC genome browser [18].
Comparative genomic analysis from 82 wild and wild - derived species grouped by microhabitat - use identified variation corresponding
with one of these QTL, further supporting broad association
with habitat use across the Malawi cichlid radiation.
He works
with Dr. Andrew Paterson on constructing and characterizing physical and genetic maps of crop plants in the genus Brassica and also works on a database to advance
comparative genomic analysis of the Brassica.
The goal of this project is to identify the specific nucleotide sequences and / or single nucleotide polymorphisms that are correlated
with expression of virulence and disease via
comparative genomic analysis between B. pseudomallei strains as well as between various bacteriophages harbored within B. pseudomallei.
The draft genome sequence of a Great Barrier Reef demosponge Amphimedon queenslandica is reported, together
with comparative genomic analysis.
Further
comparative genomic and transcriptomic
analyses showed infection severity correlated
with the expression levels of certain genes shared by nearly all E. coli, including genes involved in motility and nutrient utilization.