HIV - 1
Env gp120 C2V5 Potential N - Linked Glycosylation Site (s)(PNGs) Variations and Amino Acid Length Polymorphisms among Infected Family Members
Not exact matches
Esparza stresses that no one really knows how the differences between the various subtypes — in the sequence of their
env gene, and structure of their
gp120 — will affect people's immune responses.
In this study, we identified three new broadly neutralizing VHH, which bind to the CD4 - binding site of the
Env subunit
gp120 and bind the molecular probe used to isolate VRC01.
Env gp160 is expressed in infected cells, cleavage to
gp120 and pg41 does not occur and syncitium formation not observed.
Using an integrative approach that combined electron microscopy on the
Env trimer complex with PGT151 (led by the Ward lab) with the structure of the PGT151 Fab by x-ray crystallography (led by the Wilson lab), the scientists were able to visualize the location of the PGT151 - series binding site on the
Env trimer — which includes a spot on one gp41 protein with two associated sugars (glycans), a patch on the
gp120 protein and even a piece of the adjacent gp41 within the trimer structure — «a very complex epitope,» said Claudia Blattner, a research associate in the Wilson laboratory at TSRI and member of the IAVI Neutralizing Antibody Center who, along with graduate student Jeong Hyun Lee, was a first author of the second paper.
Curiously, despite their broad neutralizing ability, these antibodies did not bind to any previously described vulnerable sites, or epitopes, on
Env — and indeed failed to bind tightly anywhere on purified copies of
gp120 or gp41, the two protein subunits of
Env.
In fact,
gp120 and gp41 assemble into an
Env structure not as one
gp120 - gp41 combination but as three intertwined ones — a trimer, in biologists» parlance.