Sentences with phrase «nucleotide sequence database»

For example, an advisory committee made up of members of the European Molecular Biology Laboratory Nucleotide Sequence Database (EMBL - Bank) in the United Kingdom, the DNA Data Bank of Japan (DDBJ), and GenBank of the National Center for Biotechnology Information (NCBI) in the United States oversees the International Nucleotide Sequence Database Collaboration (INSDC).

In turn, Genbank will distribute the sequence data to the European Molecular Biology Laboratory's Nucleotide Sequence Database, EMBL - Bank [ebi.ac.uk], and the DNA Data Bank of Japan, DDBJ [ddbj.nig.ac.jp].

This database is produced at National Center for Biotechnology Information (NCBI) as part of the International Nucleotide Sequence Database Collaboration, or INSDC.

Not exact matches

In an ambitious study, the authors attempt to trace drug resistance against all strains of the flu by using an extensive influenza virus database containing all known genetic sequence information (70,000 complete nucleotide sequences) for influenza strains.

To homebrew our gRNA, Wagner copies the sequence of the CD32 segment we've identified and pastes it into a freely available database, Optimized CRISPR Design, that looks for a matching set of 20 nucleotides followed by N - G - G.

Sequences are deposited at the EBI nucleotide database with accession numbers: Neandertal 1 (Feldhofer 1) FM865407, Neandertal 2 (Feldhofer 2) FM865408, Sidron 1253 FM865409, Vindija 33.25 FM865410, Mezmaiskaya 1 FM865411

A tBLASTn of that CDS against the Nucleotide NCBI database revealed no significant similarity to any other sequence, except for the subtelomeres of P. vivax and P. cynomolgi.

All sequence reads were aligned to (1) plasmid sequences available in the NCBI RefSeq database (2138 sequences) and (2) sequences in GenBank nucleotide database annotated as plasmids (\ organism feature = «plasmid»)(9815 sequences).

Hits with a better match in the GenBank nonredundant nucleotide database (NT), corresponding predominantly to human genomic background sequences resulting from misannotations in GenBank, were excluded from the analysis.

To ensure that sequence data are freely available, scientific journals require that new nucleotide sequences be deposited in a publicly accessible database as a condition for publication of an article.

The nucleotide sequences for all integrases available in the database INTEGRALL [51] were downloaded (1323 sequences) and grouped using single - link hierarchical clustering with a cut - off of 90 % sequence similarity over at least 50 amino acids.

NCBI provides Gene, Online Mendelian Inheritance in Man, the Molecular Modeling Database (3D protein structures), dbSNP (a database of single - nucleotide polymorphisms), the Reference Sequence Collection, a map of the human genome, and a taxonomy browser, and coordinates with the National Cancer Institute to provide the Cancer Genome Anatomy Database (3D protein structures), dbSNP (a database of single - nucleotide polymorphisms), the Reference Sequence Collection, a map of the human genome, and a taxonomy browser, and coordinates with the National Cancer Institute to provide the Cancer Genome Anatomy database of single - nucleotide polymorphisms), the Reference Sequence Collection, a map of the human genome, and a taxonomy browser, and coordinates with the National Cancer Institute to provide the Cancer Genome Anatomy Project.

The NCBI Taxonomy database contains the names of all organisms that are represented in the genetic databases with at least one nucleotide or protein sequence.