For the first time the team discovered a way to accurately edit
RNA base pairs in human cells.
CiviŠ's team is now trying to address how
the RNA bases came together with other complex molecules to form RNA.
Examining the end products of the reaction, CiviŠ and his team found all four
RNA bases: adenine, guanine, cytosine and uracil — three of which are also found in DNA (PNAS, doi.org/xm8).
That RNA strand, they report online today in the Proceedings of the National Academy of Sciences, is able to copy almost any other RNA, from small catalysts to long
RNA based enzymes.
This project is using advanced molecular biological (i.e. DNA and
RNA based) techniques to find the role of genetics in the development and variability of a variety of feline blood cells and proteins, and in the risk for the development of diabetes in cats.
Not exact matches
These little invisible beasts — whether they be
RNA -
based noroviruses, arenaviruses like Lassa, or influenza viruses — evolve as we do... only much, much faster.
Faithful readers will recall that I've written about three developing trends for the new year and beyond: self - aggregation, de-hospitalization, and (yesterday) the bet on
RNA -
based therapies.
Biotech Moderna, a company focused on creating treatments
based on messenger
RNA (mRNA) technology, has raised a monster $ 500 million from private investors in a Series G funding round, valuing the firm at a whopping $ 7 billion.
His company, he said, had hit upon a way of delivering
RNA -
based therapeutics into live patients.
Today, I offer a third prediction — this one in the realm of drug development:
RNA -
based therapies will shine as never before.
That's a big deal because Alnylam's drug is
based on an extremely early - stage kind of medical technology called RNAi, or
RNA interference, which uses basic biological building blocks to tackle problematic genetic discrepancies.
• Ribometrix Inc, a Greenville, N.C. -
based biotech company focused on developing small molecule modulators of
RNA to treat disease, raised $ 7.5 million in seed funding.
With respect to influenza A, the
RNA polymerase which replicates the viral genome has a known error rate of ~ 1/10, 000
base pairs, which is just under the total bp count for the viral genome.
«Faith -
based groups reacted to the terrorist leader's death with renewed sympathy for victims» families, scriptural citations justifying the demise of evil, and hopeful prayers for peace among the nations,» stated the
RNA release.
A new collaborative project between the University of Helsinki and the French National Centre for Scientific Research (CNRS) is shedding light on the efficacy of environmentally friendly
RNA -
based vaccines that protect plants from diseases and pests.
This new method will enable the effective production of
RNA -
based vaccines and promote the development and adoption of
RNA -
based plant protection methods.
Together with researchers at the CNRS, the group has demonstrated the efficacy of
RNA -
based vaccines produced using the new method against plant virus infections.
Benner is convinced that 4 billion years ago, Earth was home to simple
RNA -
based organisms that could find food, grow, reproduce, and even evolve.
In newer, unpublished experiments he says he has observed
RNA molecules 700
bases long.
The best evidence of the
RNA world, though, would be finding natural
RNA -
based life that is still lurking on Earth today.
The ability of
RNA to orchestrate large - scale conformational changes may help explain why the ribosome and the spliceosome are
RNA -
based machines.
An
RNA -
based drug has treated an infection of the deadly Ebola virus — the first drug to have been shown to do so in all recipients.
The reaction involves binding an
RNA or DNA substrate by
base pairing to the internal guide sequence (IGS) to form helix P1.
They used
RNA baits designed from computationally reconstructed ancestral DNA sequences
based on known modern sequences of glyptodonts» living relatives.
In those relatively brief experiments they already see
RNA molecules up to 30
bases long, at least as long as other researchers have seen in similar experiments without ice.
To work effectively, moreover, an
RNA enzyme must fold correctly, which requires exactly the right sequence of
bases.
Cognate transfer
RNA (tRNA) binding induces global domain movements of the 30S subunit and changes in the conformation of the universally conserved and essential
bases A1492, A1493, and G530 of 16S
RNA.
Venter's samples could have been full of
RNA -
based life that would have slipped through his net.
That is a good start, but it leaves unanswered the question: How do you get from tiny snippets of
RNA to longer, well - crafted chains that could have acted as the first enzymes, doing fancy things like copying themselves The shortest
RNA enzyme chains known today are about 50
bases long; most have more than 100.
«So small pieces of
RNA could be enzymes, not just large 50 -
base molecules.»
To investigate this, they introduced random mutations into the hairpin
RNA, shortened it from its normal length of 58
bases, and even cut it into pieces — all in an effort to produce
RNA enzymes that were as dodgy and imperfect as early Earth's first enzymes likely were.
Molecules of DNA or
RNA can move through Trilogy at a rate of 10 million to 30 million
base pairs per second.
A number of researchers now theorize that DNA -
based life evolved from an
RNA -
based predecessor.
RNA -
based organisms might also be far smaller than DNA -
based life, allowing them to fit in fine rock pores where conventional microbes could not exist.
RNA -
based organisms might not make proteins, and so they could live where key ingredients for proteins, like sulfur, are absent.
The reason why biology's standard tools would fail to detect an
RNA -
based organism is because they assume that all metabolisms must be similar to our own.
So when Biebricher analyzed his own samples, he was amazed to see
RNA molecules up to 400
bases long.
Using this system, which they call Pumby (for Pumilio -
based assembly), the researchers effectively targeted
RNA sequences varying in length from six to 18
bases.
The new strategy is
based on human
RNA - binding proteins that normally help guide embryonic development.
Please recognise that the recent progress in the field of
RNA -
based gene silencing has involved original scientific inquiry from research groups around the world.»
He interprets these genes as remnants of the chronocyte, as he calls the early
RNA -
based life - form.
Finally, even the coding and
base - paring capacity of
RNA can be altered — by
RNA editing, in which
bases in the
RNA are changed on the fly.
(Later in the year, a Boston -
based team targeted
RNA in bacteria using a different Cas protein.)
These
RNA - binding proteins include sequences of amino acids that bind to one of the ribonucleotide
bases or «letters» that make up
RNA sequences — adenine (A), thymine (T), uracil (U), and guanine (G).
It is
based on the design of a small
RNA (RNAsg) that is complementary and specific to a 20 nucleotide DNA region.
Then some of Razin's colleagues showed that methyl groups could attach to cytosine, one of the chemical
bases in DNA and
RNA.
But an overlooked regulatory system
based on
RNA may hold the keys to development and evolution
The resulting concoction contained amino acids, the fundamental units of proteins, as well as the five chemical
bases that constitute DNA and
RNA.
Although the AFM remains an exotic tool to most biologists, the payoff of using it could be huge: Researchers might be able to interpret subtle changes in the shape of
RNA polymerase as it passes over each letter of the genetic code to read off the order of
bases in a genome.
Scientists are running experiments in which
RNA -
based cells may be able to reproduce and evolve.