But as we discuss here so often, life is
about gene expression and the signals your send those genes.
But the image, by Fernan Federici and Lionel Dupuy of the University of Cambridge, is not just a pretty picture — it contains information
about gene expression in the stem of genetically modified thale cress, or Arabidopsis thaliana.
Do think these folks had a clue
about gene expression?
Not exact matches
The recent Lancet Breastfeeding Series refers to new discoveries being made
about breastmilk — such as its role in
gene expression — so it can be expected that Nestle will use the strategy of launching «new improved» formulas that are «closer to breastmilk» for decades to come (Nestle is currently investing heavily in epigentics research).
We don't know much
about phallus evolution (external genitalia generally don't mineralize, so the fossil record is of little help), but we can compare the
expression of phallus
genes from organism to organism.
«We were starting to understand a lot
about circuits and cells, and we had the tools to look at
gene expression in different kinds of cells?
First, they did a quantitative analysis of the anatomy of related fossils and extant animals to generate a hypothesis
about the transition; next, they searched for possible shifts in
gene expression that correlated with the transition.
Monitoring mRNA could tell scientists a great deal
about which
genes are being expressed in a cell, and tweaking the translation of mRNA would allow them to alter
gene expression without having to modify the cell's DNA.
However, very little is known
about how the circadian clock regulates this critical part of
gene expression to organize the day - night rhythm of protein
expression, and if the formation of this looping changes over the day.
The tool then uses information from similar cells to make an educated guess
about what the level of
gene expression should be.
«Our discovery
about the ROC40 protein suggests that it may be increasing the
expression of
genes involved in the synthesis of oil in microalgae,» Rathinasabapathi said.
Researchers have videotaped cultures in which embryos develop but found no visual pattern that hints at which cells are
about to sprout, and staining for certain patterns of
gene expression has been inconclusive.
To find out more
about the differences between naive and primed pluripotent cells, the UW researchers first compared their
gene expression profiles.
In the last 15 years, researchers worldwide have generated a large amount of information
about the epigenome: proteins, factors and epigenetic markers which, when bound to DNA, regulate
gene expression.
Anyone who seriously proposes that there is a force beyond
gene expression, signaling molecules, differential adhesion, and those kinds of mechanisms, just doesn't know what they are talking
about.
With the best - performing particles, the researchers reduced
gene expression by more than 50 percent, for a dose of only 0.20 milligrams per kilogram of solution —
about one - hundredth of the amount required with existing endothelial RNAi delivery vehicles.
The study also raises questions
about the role of histone acetylation in regulating
gene expression.
The finding could reveal much
about how cells control
gene activity, and also illuminate cancer, multiple sclerosis, and other diseases spurred by faulty
gene expression.
The three - year study included cell culture studies at Rice as well as a detailed analysis of
gene -
expression profiles of more than 500 patients from the Cancer Genome Atlas and protein -
expression profiles from
about 200 MD Anderson patients.
Such an in - depth analysis of
gene expression may help clarify the course and origin of common liver disorders, including liver cancer and non-alcoholic fatty liver disease, which affects
about a fifth of the population in developed countries.
In collaboration with Prof. Ido Amit of Weizmann's Immunology Department, they analyzed the genomes of 1,500 individual liver cells, establishing patterns of
expression for
about 20,000
genes in each cell.
«What caught my attention
about autoimmunity and specifically lupus,» Anguera said, «was that there were
genes on the X chromosome that were immunity related and that had been shown to have higher
expression levels in lupus patients.»
What's really impressive
about Babar's accomplishment is that he did the work for both papers — one on the role of a population of stem cells in lung cancer development (published in Cell) the other on
gene expression in group A Streptococcus (published in PNAS)-- as a participant in summer undergraduate research programs.
In the study, they additionally confirmed that nearby genetic variation in the form of cis - eQTLs affected
expression of
about 50 percent of
genes in the samples.
An international consortium of researchers in the Genotype - Tissue
Expression (GTEx) Consortium published findings
about how genetic variation effects
gene regulation in 44 human tissue types.
Microarrays allow researchers to acquire data
about expression levels of thousands of
genes at one fell swoop.
The tip of this ear of corn is growing abnormally, but provided scientists with information
about how to tweak
expression of a key
gene to boost yield.
That's
about an eighth of the time in which conventional cell culture methods, which rely on viral
gene expression, can detect infection.
This protein is expressed in the anterior part of limb buds, and regulates the
expression of a number of
genes providing cells with information
about their position along the anterior - posterior axis.
But in the brain, the team detected much more
gene expression in humans than in chimps, whereas
gene expression in the brains of chimps and the other primates was
about the same.
«
Gene expression patterns in the hippocampus may retain information
about past locomotor activity.»
Most analytical approaches to this problem are rather rudimentary and involve calculating simple correlations among the
genes whose
expression changes in response to a perturbation, clustering the
genes by molecular or known functional class, and drawing crude inferences
about mechanism on that basis.
«We analyzed dozens of variants of this
gene and quantitatively measured
expression in
about 1,000 embryos, creating a quantitative data set that could be used to train mathematical models, utilizing parameter optimization,» Arnosti said.
It contains data on the electrical properties of
about 300 cortical neurons taken from 36 patients and 3D reconstructions of 100 of those cells, plus
gene expression data from 16,000 neurons from three other patients.
Despite having tightly controlled
expression levels, little is known
about how miRNAs themselves are regulated because their
genes are poorly defined.
When mapped to the genome, they tell us not only
about the level of
expression for various
genes, but also which transcription start sites were used.
«We are truly excited
about the RNA transcript data and the map of
gene expression that we now have for 27 different organ - specific tissues», says Professor Mathias Uhlén, Program Director of the Human Protein Atlas.
From there, scientists will study the
expression of Woolly Mammoth mutations to test predictions
about gene function.
They also discovered that in the ripe fruit, the
expression of one of these VSC - expressing
genes is
about 2,000 times stronger than it is in other parts of the plant.
In terms of the potential impact of the risk - associated variants,
about half the risk for both disorders appears to be accounted for by variants already known to influence the
expression of
genes in the brain.
There were theories
about how RNAi actually works to tamp down
gene expression.
Genetic data combined with information on
gene expression and epigenomics in relevant tissues, and clinical information, can provide clues
about the effects of genetic changes within an individual's genome that increase or decrease one's risk of developing type 2 diabetes and its complications, including heart and kidney disease.
He used the GM method to make discoveries
about what regulates
gene expression in GM plants, and
about plant transposable DNA.
Then they compared each person's transcriptome to the average transcriptome of people at the same age, intensively exploring
about 100
genes whose
expression were found to increase or decrease with aging.
By arraying nearly 18,000
genes on a glass chip
about twice the size of a postage stamp and recording the
expression patterns of those
genes, researchers have obtained detailed molecular portraits of...
Finally, Yingjie Guan, assistant professor (research) of orthopaedics at Brown and Lifespan, at the COBRE for Skeletal Health and Repair, talked
about her detailed work on how mechanical regulation of
gene expression, for instance by the micro RNA miR - 365, affects cartilage and bone health.
Thus, Haber muses, altered cancer metabolism is not just
about energy supply, but also directly affects
gene expression through regulating chromatin, and that «closes the loop» between metabolism and genetics — but still poses the chicken - or - the - egg problem of which came first.
However, little is currently known
about how death and the length of the post-mortem cold ischemia interval specifically affect
gene expression since most existing reports are based on very few
genes, tissues or individuals5, 6,7,10,11,17,18.
Genomic imprinting is a fascinating phenomenon of
expression of
about a hundred
genes only from one parental copy.
-LSB-...] Back in December, I wrote
about two studies that compared global patterns of
gene expression between germ cells and somatic cells in Volvox carteri, one by Benjamin Klein, Daniel Wibberg and Armin Hallmann from the University of Bielefeld in Germany and one by Gavriel Matt and Jim Umen from Washington University in St. Louis and the Donald Danforth Plant Science Center, respectively.