Sentences with phrase «analyzed gene expression data»
Not exact matches
In the Nature Methods paper, Corrada Bravo, UMD computer science doctoral student Florin Chelaru, and undergraduate research assistants from Williams College in Mass. and Washington University in St. Louis used Epiviz to visualize and analyze DNA methylation and gene expression data in colon cancer.
https://www.sciencedaily.com/
«We analyzed dozens of variants of this gene and quantitatively measured expression in about 1,000 embryos, creating a quantitative data set that could be used to train mathematical models, utilizing parameter optimization,» Arnosti said.
They are also developing sgRNAs that will enable even more fine - tuning of gene expression levels and on software for analyzing the data.
The quintile normalized data were analyzed to identify genes with significantly up - or down - regulated expression (FDR p - value < 0.05) with an arbitrary cutoff of at least a two-fold change.
We focus on developing computational methods and tools for (a) analyzing large - scale gene expression data related to human cancer in search for gene markers and disease sub-categories, (b) identifying regulatory elements such as miRNA precursors and their targets in whole genomes of plants and mammals, (c) building theoretical models of gene regulatory networks.
Gene expression data of embryos were analyzed by one - way ANOVA in JMP ® software (SAS Institute, Cary, NC).
A reliability score is set manually for all genes and indicates the level of reliability of the analyzed protein expression pattern based on available protein / RNA / gene characterization data from both HPA and the UniProtKB / Swiss - Prot database.
Gene expression data (CNRQ) of oocytes and cumulus cells were analyzed by one - way ANOVA with Bonferroni post test in Prism version 5.02.
A reliability score is set for all genes and indicates the level of reliability of the analyzed protein expression pattern based on available protein / RNA / gene characterization data.
Makarevitch I, Martinez - Vaz B. (2017) Killing two birds with one stone: Model plant systems as a tool to teach the fundamental concepts of gene expression while analyzing biological data.
In this activity students analyze data on the expression of the tb1 gene and use it to formulate an explanation as to how a specific difference in the corn version of the gene explains the phenotype of less branching.