May act
as a scaffolding protein within caveolar membranes.
Not exact matches
Claudio Vita and his colleagues at the
protein engineering department of CEA, the French nuclear research agency in Gif - sur - Yvette, are using the toxins found in scorpion venom
as a chemical
scaffold to build novel
proteins for use
as drugs (Proceedings of the National Academy of Sciences, vol 92, p 6404).
The group believes that in normal individuals, the prion
protein works
as a
scaffold for multiple molecular interactions.
When prion
protein molecules are sequestered by their misfolded counterparts, they can no longer work
as a
scaffold for all these molecular interactions, which impairs the mechanisms evoked by the brain chemicals important for mood.
To this aim, the researchers incorporated molecules into the
scaffolds that are known
as the major histocompatibility complex (MHC) and that presented small peptides derived from viral
proteins to T cells.
As a result,
scaffold proteins have been exploited by evolution, pathogens, and cellular engineers to reshape cellular behavior.
Bressloff, along with mathematical biologist Berton Earnshaw, conceived of the dendritic spine — the mushroom shape at the downstream end of the neuron —
as a two - compartment box: On the far downstream end, essentially in the synapse,
scaffolding proteins suspend AMPA receptors so they can bind glutamate signals coming from the upstream neuron.
With
as many
as a thousand tubes fitting into each cell, the tubular
scaffold can be used to increase the bacteria's efficiency to make commodities and provide the foundation for a new era of cellular
protein engineering.
Perineuronal nets (PNNs),
as they are known today, are
scaffolds of linked
proteins and sugars that resemble cartilage.
Histones are
proteins that serve
as a
scaffold for coiling up the DNA into the tight space of the nucleus.
The EB family of
proteins helps regulate this process and can act
as a
scaffold for other
proteins involved in pushing the microtubule chain forward.
Each neuron contains hundreds of long, cylindrical
protein structures, called microtubules, that serve
as scaffolding.
In animal tissues and organs, cells lock into a
scaffold of collagen
proteins that allows the cells to stick together and coordinate activities, such
as tissue repair.
The «parts list» in these processes is similar: Microtubules, semi-rigid tubes of
protein, can serve within the cell
as scaffolding, roadways, and a building material for machinery; some
proteins serve
as fasteners, binding and releasing other materials; and motor
proteins use chemical energy to push and pull materials along microtubules, or move the microtubules themselves.
The majority of
proteins found were identified
as adaptor
proteins, which serve
as scaffolds within the Adherens Junction.
This
protein scaffold is known
as the outer coordination sphere (OCS).
A novel role for TPX2
as a
scaffold and co-activator
protein of the Chromosomal Passenger Complex % U http://www.sciencedirect.com/science/article/pii/S0898656812001295.
A novel role for TPX2
as a
scaffold and co-activator
protein of the Chromosomal Passenger Complex.
Her previous work identified the
scaffold protein p62
as a critical component of the mTORC1 nutrient - sensing signaling complex.
Their new method, which Yeates calls «
scaffolding,» can be modified easily to bind to many different
proteins as a «universal
protein scaffold.»
The
proteins encoded by the most probabilistic sequences at these nodes11 were prepared and used
as scaffolds for engineering.
Here, we use resurrected Precambrian
proteins as scaffolds for
protein engineering and demonstrate that a new active site can be generated through a single hydrophobic - to - ionizable amino acid replacement that generates a partially buried group with perturbed physico - chemical properties.
A rare, premature aging disease, Hutchinson - Gilford progeria is caused by a single point mutation in the gene encoding lamin A, which forms a
protein scaffold on the inner edge of the nucleus that helps maintain chromatin structure and organize nuclear processes such
as RNA and DNA synthesis.
It will be important, Panne says, to dissect in detail how
scaffold proteins, such
as the CBP and p300 co-activators, contribute to the rich gene regulatory language, how such chromatin modifiers are targeted to the genome, how their activity is regulated, and how chromatin modifications contribute to the signaling reaction.
Repeat
proteins are ideal choices for development of such systems
as they: (i) possess a relatively simple relationship between sequence, structure and function; (ii) are modular and non-globular in structure; (iii) act
as diverse
scaffolds for the mediation of a diverse range of
protein —
protein interactions; and (iv) have been extensively studied and successfully engineered and designed.
Other
proteins may also be utliized
as scaffolds, including the set of red fluorescent
proteins.
Given the multiple PDZ domain structure and the ability to interact with a wide range of different
proteins, an obvious primary function would appear to be
as a
scaffolding and targetting
protein, taking receptors and other
proteins to their final destinations within synapses and anchoring them there.
Tang, Jonathan C.Y., et al. «A nanobody - based system using fluorescent
proteins as scaffolds for cell - specific gene manipulation.»
Specifically, we have pioneered a technique to repurpose the matrix
proteins of bacterial biofilms
as programmable materials
scaffolds that can be produced easily and cheaply.
The Meiler laboratory develops technologies to engineer
protein, for example through assembly of large
protein scaffolds from fragments (Fortenberry, C.; et al.; «Exploring symmetry
as an avenue to the computational design of large
protein domains»; JACS 2011; 133; 18026 & Eisenbeis, S.; et al.; «Potential of Fragment Recombination for Rational Design of
Proteins»; JACS 2012; 134; 4019).
Other
proteins have structural or mechanical functions, such
as those that form the cytoskeleton, a system of
scaffolding that maintains the cell shape.