These studies are unable to determine a causal relationship due to factors such
as gene regulation — a genetic variant may instead contribute to altered expression levels of true causal genes, which remain undetected by a GWAS.
Animals need these as essential nutrients for a wide range of basic bodily chores, such
as gene regulation, cell signaling and amino acid breakdown.
Because RNA carries the genetic message from DNA to the cell's proteinmaking factories, or can directly perform acts such
as gene regulation, it, too, is an appealing target for therapies.
This complex process of controlling the production of proteins is known
as gene regulation.
Not exact matches
Interestingly,
as many
as nine of the
genes have been previously associated with some vascular disease and four more are known to be involved in the
regulation of vascular tone, supporting the importance of blood vessels in migraine attacks.
The focus thereby was on microRNA — a short, single - stranded RNA molecule that is now recognised
as playing an important role in
gene regulation.
«The reversible nature of the m6A methylmark adds a new layer to the
regulation of
gene expression now termed «epitranscriptomics» and warrants further research to establish links with human disease such
as cancer,» adds Dr Irmgard Haussmann of Coventry University.
The auf1
gene had previously turned up
as a player in cytokine
regulation.
But with smaller parties standing to gain political influence, battles over issues such
as the
regulation of
gene - edited organisms and how to cut greenhouse - gas emissions could grow fiercer.
The Greens want the same strict
regulation for organisms that have been
gene edited with precision technologies such
as CRISPR,
as has been put in place for those modified with conventional, less precise techniques.
The unexpected finding may also spark a new avenue of research on a type of
gene regulation known
as imprinting.
Histones and other proteins, when modified by this process known
as acetylation, play critical roles in
regulation of
gene expression, typically resulting in increased
gene expression.
«Changes in
genes»
regulation — not in the DNA sequence of
genes themselves — were the driving force behind successful metastases in our experiments, and,
as far
as we know, this is the first genomewide experimental evidence for this phenomenon.»
Now researchers have identified a mutation in the human ATP4a
gene that is involved in the gastric acid secretion
regulation and has been identified
as responsible of an aggressive form of inherited, early - onset gastric NET.
«Telomerase is a unique protein - RNA complex where the protein subunit uses its RNA component
as a template to add identical fragments of DNA to the end of chromosomes,» said Emmanuel Skordalakes, Ph.D., associate professor in the
Gene Expression and
Regulation program of Wistar's NCI - designated Cancer Center.
Rather than inert spools, histones are increasingly seen
as active cogs in a cell's
gene regulation machinery.
The second insight involved changes in the evolution of
gene regulation:
As social complexity increased, so did the speed of changes to parts of the genome involved in regulating
gene activity, located in the promoters of the
genes, the researchers report.
This form of interference with bacterial
gene regulation is also of pharmaceutical interest
as it is known that pathogenic bacteria can protect themselves against attack by the immune system and the effect of antibiotics by forming biofilms, for instance on the epithelium of the respiratory system.
To achieve this, the researchers took advantage of a phenomenon known
as quorum sensing, which is used by many species of bacteria to coordinate
gene regulation in response to their population density.
It seems to be that we also get a fine - tuned
as well
as important
gene regulation machinery that can be influenced by our environment and individual lifestyle.
A vital and ancient component of
gene regulation, miRNA tunes the expression of
as many
as 30 - 60 % of mammalian protein - encoding
genes, usually silencing them.
The open portions of the genome include
genes themselves,
as well
as many regions that contribute to the
regulation of their activities (the switches).
While the study represents a strong start for understanding how eQTLs affect
gene regulation and expression, Engelhardt pointed out that she and her colleagues still do not have enough samples to understand trans - eQTLs
as deeply
as they would like.
Dillman explained that his research team also learned more about
gene regulation and the evolution of genomes in general
as it compared the five sequences with other nematodes.
New
gene - editing technologies such
as CRISPR have sped the development of new crop varieties and animals, but products based on engineered organisms sometimes face a web of complex and overlapping
regulations before they can reach the market.
Moreover, the ability to easily program sequence - specific DNA targeting and cleavage by CRISPR - Cas components,
as demonstrated for Cas9 and Cpf1, allows for the application of CRISPR - Cas components
as highly effective tools for genetic engineering and
gene regulation in a wide range of eukaryotes and prokaryotes.
The team discovered that the
genes responsible for the
regulation of NRL became more refined in the placental mammals
as the modern retina evolved and were lost in several non-mammalian groups.
Examples include
gene technology, where
regulations in China are not
as stringent
as in the United States.
«We realized that studying the lithium response could be used
as a «molecular can - opener» to unravel the molecular pathway of this complex disorder, that turns out not to be caused by a defect in a
gene, but rather by the posttranslational
regulation (phosphorylation) of the product of a
gene — in this case, CRMP2, an intracellular protein that regulates neural networks,» added Snyder.
Scientists have discovered many points of
regulation in the process of using a specific DNA template to make a protein, known
as gene expression, that allow the cell to control how much of a certain protein is made at a certain time.
Many miRNA
genes, therefore, lack annotated features such
as a promoter or splice sites, hindering progress in understanding their transcriptional and post-transcriptional
regulation.
We had suspected that the Mycoplasma genome might have a similar overall organisation to other bacteria, but we were completely surprised to find that it was also organised into domains, which can be considered
as regulatory units of chromatin organisation and that we had identified a previously unknown layer of
gene regulation.
This work is one basis for the use in the scientific community of transgenes
as a major technique to study
gene regulation in normal and malignant cells.
Compared with the ancestral lineage, the East African cichlid genomes possess: an excess of
gene duplications; alterations in regulatory, non-protein-coding elements in the genome; accelerated evolution of protein - coding elements, especially in
genes for pigmentation; and other distinct features that affect
gene expression, such
as insertions of transposable elements and
regulation by novel microRNAs.
Transcriptional
regulation information for a
gene, including any predicted DNA binding site motifs (YeTFaSCo) for the
gene's protein product,
as well
as any of its targets (
genes it regulates) or regulators (
genes that regulate it), based on experimental evidence.
The involvement of NF - κB in β - interferon
gene regulation reveals its role
as widely inducible mediator of signal transduction.
Fold change of
genes identified for
regulation of skeletal extension and growth, is presented
as treated vs. control during daytime, night - time and without treatment.
Transgenic mice are extremely useful for scientists studying
gene function or
regulation and human diseases, such
as Alzheimer's disease.
What is known from global studies is that exposure to biologically active compounds, even at ng / L concentrations, can impact endocrine systems in nature and manifest
as negative impacts like altered
gene regulation, the presence of mixed reproductive tissues (intersex) and skewed sex ratios.
This could be an indication of a controlled expression of
genes responsible for calcification during daytime,
as evidenced by the up -
regulation of
genes associated with the cartilage and bone biogenesis process.
Transcriptome studies such
as the National Institute of Health's Genotype - Tissue Expression (GTEx) program aim to overcome this limitation by studying
gene expression levels and
regulation mechanisms and their relationship with diseases, instead of only DNA sequence.
RNA - based
gene regulation is revealing itself
as key to understanding cellular function, organismal development and homeostasis.
In this study, we also identify p21waf1 / cip1
as a target
gene of DDX3, and the up -
regulation of p21waf1 / cip1 expression is linked to the growth - suppressive effect exerted by DDX3 (see Fig. 2).
Because DDX3 exhibits tumor suppressor functions, such
as a growth - suppressive property and transcriptional activation of the p21waf1 / cip1 promoter, and is inactivated through down -
regulation of
gene expression or alteration of subcellular localization in tumor cells, all these features together suggest that DDX3 might be a candidate tumor suppressor.
Several functions vary among the members of this group of bacteria, such
as metabolism of nitrogen, respiration, cell wall and capsule, stress response, secondary metabolite biosynthesis,
regulation and cell signaling; this variation in
gene functions could help us understand the ability of colonization and adaptability of these rhizosphere - colonizing bacteria.
Additionally, we identified p21waf1 / cip1, a cyclin - dependent kinase inhibitor,
as a target
gene of DDX3, and the up -
regulation of p21waf1 / cip1 expression accounted for the colony - suppressing activity of DDX3.
Bach1 is a member of the BTB and CNC transcriptional regulator family that, like Nrf2, binds to ARE sequences
as heterodimeric complexes with small Maf proteins [18] A major physiological role for Bach1 is in iron homeostasis through
regulation of the expression of heme oxygenase - 1 (HMOX1), ferroportin (FPN1) and Ferritin (FTH)
genes [23], [24], [33], [41].
Research Focus: I dedicate my time and effort to develop high - throughput sequencing technologies such
as single cell transcriptomic, ChIP - Seq, ChIA - PET, and many more... The scientific rational is to understand better and with a different angle, the mechanisms of epigenetic
regulation of
gene expression in (rare) immune cells, pathologically relevant in many diseases such
as asthma, SLE, tuberculosis...
We have a longstanding interest in understanding
gene expression
regulation, and in our wetlab at the Sanger Institute use mouse T helper cells
as a model of cell differentiation.
For each such peak, they identified
genes within 50 kb
as potential targets of
regulation.