Sentences with phrase «bioinformatics analysis for»

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Data access and analysis tools are being made available for the 3K RGP dataset through the International Rice Informatics Consortium (IRIC), which promotes collaboration in bioinformatics analysis of rice data and provides computational tools to facilitate rice improvement via discovery of new gene - trait associations and accelerated breeding.

The Moores Cancer Center's Molecular Tumor Board brought together medical, surgical and radiation therapy oncologists, biostatisticians, radiologists, pathologists, clinical geneticists, basic and translational science researchers, and bioinformatics and pathway analysis specialists to discuss the intricacies of tumor genetics and tailor a personalized treatment plan for patients with advanced cancer or who have exhausted standard therapies.

Eager to sort through the pile of curriculum vitae's on his desk, Rudnicki is particularly looking for molecular geneticists working on different stem cell systems; scientists with genomics bents like proteomics, microarray analysis, and bioinformatics; and a couple of clinician scientists.

This progress has imposed increasingly high demands on the bioinformatics tools necessary for analysis of the data generated, which has grown exponentially.

It is a powerful tool for incorporating pathways into bioinformatics workflows and makes the analysis behind OmniPath fully open source, transparent and easily reproducible.

The bioinformatics tools comprise a series of scripts for quality control analysis and biological analysis of the resultant sequencing data.

The TrueMethyl Whole Genome (TMWG) integrated workflow system for processing DNA samples includes all - in - one reagents for sample conversion, library creation, and indexing, combined with bioinformatics tools to enable accurate DNA modification analysis through next - generation sequencing methods.

GeneTraffic is a bioinformatics server system for microarray data storage and analysis in Minimum Information about a Microarray Experiment (MIAME) compliant format [50].

The Virus Pathogen Resource (ViPR) is a US NIH / NIAID - funded, freely - available online bioinformatics resource for search, analysis and visualization of data about 14 different families of human pathogenic viruses, including Coronaviridae (SARS, MERS), Flaviviridae (Dengue, Zika, West Nile, Yellow fever, Hepatitis C), Picornaviridae (Polio, Enterovirus D68), Togaviridae (Chikungunya, EEEV, VEEV, Rubella), Arenaviridae (Lassa), Filoviridae (Ebola, Marburg), Herpesviridae (HSV, EBV, CMV), and Poxviridae (Smallpox).

The Jenner will provide RNAseq and / or bioinformatics analysis of pre-existing transcriptomics data for up to 200 samples from vaccine clinical trials.

A mean of 0.3 million (SD 88 000) reads per sample from the 8 - plex sequencing analysis and 2.3 million (SD 474 000) from 2 - plex sequencing matched our bioinformatics criteria for calculation of percentage chromosome 21.

While there are very good bioinformatics tools for the analysis, validation and comparison of detailed atomic structures, at present there are very few tools available to work with low - resolution data (i.e. volume or shape data).

Patient registries, biobanks and bioinformatics analysis tools are the key infrastructure tools required for omics research.

The Intel «Cherry Creek» supercomputer — which ranks among the world's fastest and most powerful supercomputers for its combination of speed, power, and energy efficiency — cut down calculation time on complicated analyses from years to days, advancing fields such as genomics and bioinformatics, medical and climate research, molecular modeling, and data analytics.

Ebba is a Master student from the «X-program» (Engineer program in Molecular Biotechnology) from Uppsala University, and she will work on building efficient bioinformatics pipelines for efficient analyses of large amounts of next - generation sequencing data.

Herein, we describe the Cancer Stem Cells Therapeutic Target Database (CSCTT), the first online database to provide a rich bioinformatics resource for the display, search, and analysis of structure, function, and related annotation for therapeutic targets of cancer stem cells.

The idea behind our work in bioinformatics is to build on existing methodologies regarding large - scale data analysis and to develop novel algorithms for processing and merging complex biological data from multiple sources such as gene expression data, sequence information, protein - to - protein interaction data, clinico - pathological data etc..

Cold Spring Harbor Laboratory's DNA Learning Center invites you to apply to a free two - day bioinformatics and molecular biology workshop featuring DNA Subway — a free, classroom - friendly bioinformatics platform for genomic analyses.

The LymphoTrack ® product lines, LymphoTrack Dx (CE - IVD) and LymphoTrack (Research Use Only), build upon the significant advancements made in massively parallel sequencing using the MiSeq ® and Ion PGM ™ instruments and offer a complete solution: kits include multiplex master mixes with built in adaptors and indices for a one - step PCR to generate sequence ready amplicons, controls, and complimentary bioinformatics software for easy data analysis, visualization, and interpretation.

Facility functions include: statistical analyses and computational modeling for all types of high - throughput data; advanced bioinformatics tools for integrative cancer biology; and data management.

CLC Genomics Server is a software solution for deployment on your central compute cluster or compute server for centralized bioinformatics analysis and sharing of data generated from all High - Throughput Sequencing platforms.

We report unbiased metagenomic detection of chikungunya virus (CHIKV), Ebola virus (EBOV), and hepatitis C virus (HCV) from four human blood samples by MinION nanopore sequencing coupled to a newly developed, web - based pipeline for real - time bioinformatics analysis on a computational server or laptop (MetaPORE).

At the end of its second year, RD - Connect has successfully achieved its objectives for the period and has made significant progress on the development of the central platform for omics data and the associated bioinformatics tools for data analysis, the integration of biobanks and registries, and the ethical framework for data sharing.

So, with National Science Foundation funding, we developed a set of laboratories illustrating key concepts of gene analysis in plants, including the relationship between phenotype and molecular genotype, genetic modification of plants and detection of transgenes in foods, and linkage and bioinformatics methods for gene mapping.

Our goal is to provide intuitive bioinformatics tools for the visualization, interpretation and analysis of pathway knowledge to support basic research, genome analysis, modeling, systems biology and education.

If you have questions about your experimental design of for more information about bioinformatics analysis, please contact Chang - gong Liu, Ph.D., prior to performing your experiment.

We report unbiased metagenomic detection of chikungunya virus (CHIKV), Ebola virus (EBOV), and hepatitis C virus (HCV) from four human blood samples by MinION nanopore sequencing coupled to a newly developed, web - based pipeline for real - time bioinformatics analysis on a computational server or la

Systems biology and bioinformatics analyses are employed to compare research results from model organisms with human aging to develop models and predictions for causative molecular mechanisms and circuits that influence human aging.

By using novel strategies of data acquisition and analysis, writing my own algorithms for data analysis, and of course also using existing bioinformatics knowledge to the best of my capabilities, I was able to successfully contribute to the advancement of microalgal and fungal bioinformatics and systems biology research.

Data access and analysis tools are being made available for the 3K RGP dataset through the International Rice Informatics Consortium (IRIC), which promotes collaboration in bioinformatics analysis of rice data and provides computational tools to facilitate rice improvement via discovery of new gene - trait associations and accelerated breeding.

• Developed bioinformatics approaches for semi-automated genome assembly, administering, organizing, analysis, and finishing of pathogen identification.

Tags for this Online Resume: next generation sequencing, microarray analysis, bioconductor, perl, bioperl, bioinformatics, c, MySQL, microbiology, BSL2, BSL3, DNA extraction, ELISA, cell culture, laboratory

Edinburgh About Blog Fios Genomics is a bioinformatics provider of data analysis services to Pharma, CROs and academia for drug discovery & development and applied research across all species.

Plymouth, MI About Blog Advaita Bioinformatics develops bioinformatics software tools for gene - expression analysis in research and pharmaceutical industries.

Proteomes covers the multi-disciplinary topics of structural and functional biology, protein chemistry, cell biology, methodology used for protein analysis, including mass spectrometry, protein arrays, bioinformatics, HTS assays, etc..