Sentences with phrase «by deep»

Today's topic is brought to you by Deep Nutrition reader (listener) Candace Bohannon Reyes, who was kind enough to permit me to post her wonderful and thought - provoking letter, which I wish all moms - and - dads - to - be could read.

These muscles attach to your pelvic bones and are connected to your glutes by the deep internal fascia layer.

In other words, they are led by a deep sense of curiosity, by an inner pulsating desire to understand themselves and the world better and more precisely.

Even more crustal minerals were formed by plate tectonics with the help of lubricating ocean water, atmospheric oxygen from the successful development of photosynthetic microbes, and land - based lichens (of algae and fungi) and mosses which were followed by deep - rooted plants that hastened the erosion and weathering of surface rocks with the help of biochemical action and the creation of soils as well as new clay minerals.

Among the surprises are a watery, gaseous plume; a south polar hot spot; and a surface marked by deep canyons and thick flows.»

By SNP analysis, single nucleotide differences between the sequences of 22Rv1 - associated XMRV and XMRV genomes detected in prostate cancer tissues [VP35, VP42, and VP62 (2006)-RSB-(red lollipops) are corrected by the deep sequencing coverage data (black lollipops).

ChIP - Seq (ChIP followed by deep sequencing of DNA) is an extension of ChIP technology to determine the chromatin enrichment of a transcription factor on a genome - wide scale.

kdm2aa mutant fish also develop melanomas from early adulthood onwards which are independent from mutations in braf and other common oncogenes and tumour suppressors as revealed by deep whole exome sequencing.

Interestingly, in the current study, we were unable to recover sequence from this related MLV in a fresh aliquot of 2003 LnCaP cells by deep sequencing, and instead, found only XMRV (Fig. 5; Fig.

Importantly, while the RNA from sample VP62 extracted in 2006 was positive for XMRV, RNA extracted from the same prostate tissue in 2012 was found to be negative not only by ViroChip and PCR (Fig. 2; Table 1) but also by deep sequencing, with no XMRV sequences detected out of 4 million deep sequencing reads (Fig. 5).

I am particularly fascinated by the deep - sea environment and how its inhabitants have adapted to see in dim light conditions and for viewing bioluminescence.

Notably, we found evidence of XMRV infection of a 2003 LNCaP prostate cancer cell line by deep sequencing (Fig. 5).

Both of these cell line - associated XMRV genomes were found to exhibit a lower degree of intra-strain variation than previously reported for XMRV from 22Rv1 cells [20], with only 19 SNPs detected in the 22Rv1 - associated XMRV genome at the 3 % frequency cutoff by deep sequencing, and only 25 SNPs in the LNCaP - associated genome (Fig. 7A; Table S1).

No reads corresponding to mouse mitochondrial or intracisternal A-particle (IAP) sequences were detected in these 3 samples by deep sequencing and specific RT - PCR (data not shown).

But food is hard to come by deep underground.

Here we present fCCAC, an application of functional canonical correlation analysis to assess covariance of nucleic acid sequencing datasets such as chromatin immunoprecipitation followed by deep sequencing (ChIP - seq).

It is therefore striking that the three most common SNP variants identified in LNCaP - and 22Rv1 - associated XMRV by deep sequencing, A790G, A4264G, and C8122G, are also present in the 3 prostate cancer - associated XMRV genomes.

Taken together, these results support the utility of VarScan for variant detection in next - gen sequencing, and demonstrate the feasibility of large - scale mutational profiling by deep resequencing of pooled samples.

Dawn's ion propulsion system is based on the technology successfully demonstrated by Deep Space 1.

From the Associated Press: «Alabama, pushed to second in national obesity rankings by deep - fried Southern favorites, is cracking down on state workers who are too fat.

We assayed (1) the absolute number of 16S rRNA gene copies and (2) overall community structure queried by deep sequencing of 16S rRNA gene tags.

Here we show that the East Greenland Ice Sheet existed over the past 7.5 million years, as indicated by beryllium and aluminum isotopes (10Be and 26Al) in quartz sand removed by deep, ongoing glacial erosion on land and deposited offshore in the marine sedimentary record.

However, foraminifera data are limited and difficult to obtain by deep - sea sediment coring, and the shells are not perfect proxies for ocean conditions.

And a re-examination of the original study suggested that the planet might be an artifact of the data processing, according to a report by the deep - space exploration site Centauri Dreams.

Subsequent explorations by the deep - sea submersible Alvin revealed not only the presence of hydrothermal vents, but also a startling array of giant worms, clams, and mussels.

Magnus Manske, Olivo Miotto et al (2012) Analysis of Plasmodium falciparum diversity in natural infections by deep sequencing.

That is replaced by deep, cold water that wells up towards the surface.

Non-market supporting services are provided by deep - sea ecosystems in the form of habitat provision, nursery grounds, trophic support, refugia, and biodiversity functions provided by assemblages on seamounts, coral and sponge reefs, banks, canyons, slopes, fjords and other settings (Armstrong et al., 2012; Mengerink et al., 2014; Thurber et al., 2014; Levin and Le Bris, 2015).

Climate mitigation by the deep ocean may ultimately compromise many of the ecosystem services we value.

20 February 2018 — Wastewater created during oil and gas production and disposed of by deep injection into underlying rock layers is the probable cause for a surge in earthquakes in southern Kansas since 2013, a new report in the Bulletin of the Seismological Society of America concludes.

The planet could be gaseous or covered by a deep ocean, notes NASA.

This work was supported by the Deep Carbon Observatory, the Ministry of Education and Science of the Russian Federation, NSF EAR, and the Carnegie Institution for Science.

Harvard's Center for Research on Computation and Society (CRCS) brings computer scientists together with a broad range of scholars from other fields to develop new computer science theory and technology in the public interest, informed by a deep knowledge of the societal issues at stake.

The actual coverage achieved by deep sequencing as determined by alignments to the fully sequenced genome of TMAdV is much higher (red).

Our approach uses metagenomic DNA to construct large ‐ scale heterologous expression libraries that are tracked over time in vivo by deep sequencing and computational methods.

Furthermore, the VHH elicited in different animals, while sharing functional hallmarks, were encoded by distinct sequences and thus could not have been identified by a deep sequencing analysis alone.

In the absence of HIV infection, the cxcr4 disruption frequency remained stable over time in four independent experiments testing four different ccr5 wild type donors as measured by deep sequencing.

The regulation of adult rodent hippocampal neurogenesis by deep brain stimulation.

Cell growth was monitored every 48 hours post-stimulation for approximately two weeks and the efficiency of CXCR4 disruption was assessed at day five post-transduction by both the Surveyor nuclease assay and by deep - sequencing of the CXCR4 target site.

When injection wells intersect with fracked wells and abandoned wells, the combined effect is that many of the natural protections assumed to be provided by deep underground geology no longer exist.

TFUMseq (Temporal FUnctional Metagenomics sequencing) uses shotgun libraries cloned into a recipient bacterial species, tracked over time in gnotobiotic mice by deep sequencing and computational methods.

Deep sequencing analysis has shown that this is highly unlikely in the case of J3 as no sequences were generated by deep sequencing of the seven naïve llamas or three other immunized llamas that share greater identity with J3 than its putative germ line V gene.

And planetary geologists had seen signs in the moon's surface lavas that indicate that its 100 known volcanic hot spots are fed by a deep magma «ocean.»

The dangling fluorescent red lures may resemble copepods (tiny relatives of shrimps) eaten by some deep - sea fish, the team reports 8 July in Science.

Transport by these deep - reaching eddies provides a mechanism for spreading the hydrothermal chemical and heat flux into the deep - ocean interior and for dispersing propagules hundreds of kilometers between isolated and ephemeral communities.

But when it comes to explaining the Cambrian explosion, Darwin's Doubt is compromised by Meyer's lack of scientific knowledge, his «god of the gaps» approach, and selective scholarship that appears driven by his deep belief in an explicit role of an intelligent designer in the history of life.

«This is an exciting achievement since traditional physics - based hologram reconstruction methods have been replaced by a deep - learning - based computational approach,» Rivenson said.

By measuring the isotopes in all of the most common species, the researchers were able to estimate how much carbon is captured and stored by these deep water fish.

Weather, another complex topic, is well suited to analysis by deep - learning approaches.

Ms. Fleck experienced complex partial seizures, characterized by a deep stare, unresponsiveness and loss of control for a minute or two.