These hard puzzles can only be solved
by systems biology, proponents say.
Not exact matches
«The forms of a living being are not but rather come to be,» says Ludwig von Bertalanffy (BW 120), and his «organismic»
biology and later general
system - theory for overcoming the opposition between mechanism and vitalism has given central insights of Whitehead a new formulation on the basis of science, 8 Something similar holds for all the directions of research which Jean Piaget has brought to the [264] concept of genetic structuralism.9 The genetic epistemology founded
by Piaget has proved through empirical research on the problem of knowledge the fruitfulness both of genetic analysis and of Whitehead's principle of process.
Waddington's paper in Towards a Theoretical
Biology follows on from one
by Brian Goodwin («A Statistical Mechanics of Temporal Organization in Cells») in which Goodwin looks at the question of how ordered
systems like cells, and still more macro-organisms, supervene on the movements of their constituent molecules, and how one is to close the gap between molecular
biology and cell physiology.
SOGI policies attempt to impose,
by force of law, a
system of orthodoxy with respect to human sexuality: the belief that marriage is merely a union of consenting adults, regardless of
biology, and that one can be male, female, none, or both, again, regardless of
biology.
These are the ideas which were first brought forward in
biology by thinkers such as Needham and Woodger (with myself acquiescing on the side - lines) under the name «Organizing Relations,» and
by Bertalanffy, who conducted a vigorous propaganda campaign on their behalf, under the name of «
Systems Theory, and finally
by Norbert Wiener, with equal fervour, as «Cybernetics.»
Not that that's necessarily the very first way Darwinian
systems began, but at some point they had to transition into a
system more related to modern
biology where cells are all bounded
by membranes.
The agency supports network science through individual institutes (for example, the National Institute of General Medical Sciences funds nine National Centers for
Systems Biology, academic centers that emphasize network
biology) and through agencywide initiatives (such as the National Technology Centers for Networks and Pathways, funded
by the NIH Roadmap for Medical Research and the recently announced Human Connectome Project, which aims to map the connections among the human brain's 100 billion neurons).
Peng Yin, a
systems biologist at Harvard University, who was not involved in the new research, says he is impressed
by the work and calls it «an important advance for molecular programming, dynamic DNA nanotechnology and in vitro synthetic
biology.»
Working with colleagues at the Center for Theoretical Biological Physics at the University of California, San Diego, he wants to unravel what it is that makes bacteria so adept at survival
by looking at pattern formation in complex dynamic
systems alongside the molecular
biology and biophysics of bacteria.
My cancer
systems biology team at the University of California, Merced, is tackling diagnosis and treatment of therapy - resistant cancers
by elucidating the network of changes within cells as a way to identify new drug targets and circumvent cancer resistance.
I realize that your «Working Group On Review Of Bioengineering And Technology And Instrumentation Development Research», defined «bioengineering and technology» as encompassing areas such as biotechnology, functional genomics, informatics, chemistry and physics, nevertheless they did not discuss the problems experienced
by physicists engaged in basic research on the frontier of physics and
biology from the present
system of study sections.
By fitting DNA into an engineering template, the messy field of
biology emerges as a complex but somewhat predictable
system — one that synthetic biologists have begun to maneuver in recent years.
For example, among the latest EMBL selection for the international Ph.D. program, there are quite a few students of
biology who financed their studies
by working as
system managers or software developers, i.e., with the right kind of general background.
The St. Laurent Institute, a non-profit medical research institute focused on the
systems biology of disease, today announced in a study published in the July edition of Genome
Biology, that genetic matter, previously ignored
by the scientific community, may play an important role in cancer.
Undergraduate Sophia Hsing - Jung Li is excited
by this new field of «
systems biology.»
More recently, reductionism has been counterbalanced
by the emergence of «
systems biology,» which I expect to reanimate the crucial link between basic science, clinical research, and medical practice.
His research group focuses on big data network
biology, exploring biological
systems by developing and deploying algorithms aimed to predict cell behavior, in particular looking at cellular signal processing and decision making.
«But it doesn't matter because the way that we're trying to build
systems biology is
by bringing together pillars of expertise and letting the osmosis between them generate something new.»
Systems biology is just starting to be recognized
by federal and provincial granting councils, says Figeys.
The new research recently published
by scientists at the Okinawa Institute of Science and Technology Graduate University (OIST) in the journal Soft Matter carefully examines the relationships between self - motile and passive or inert agents to determine possibility of creating fully synthetic
systems by looking into examples of
biology interacting with mechanical mechanisms.
Lead author Aaron Allen was a PhD student in cell &
systems biology at U of T when the work was done, and he was assisted
by Sokolowski, fellow EEB student Ina Anreiter, and Oxford University collaborator Megan Neville, who taught Allen the technique.
In recent years, the study of human
biology has been shaken up
by discoveries of how the bacteria that live in the gut, the so - called microbiome, affect metabolism, the immune
system, and disease progression.
The approach combined experimental synthetic
biology led
by Mark Isalan, now Reader in Gene Network Engineering at the Department of Life Sciences of Imperial College London with computational modelling led
by James Sharpe, ICREA Research Professor and head of the Multicellular
Systems Biology lab at the CRG.
If life today is the result of evolution
by natural selection, Darwin realized, then even the most complex
systems in
biology must have emerged gradually from simple precursors, like someone crossing a river using stepping - stones.
By using a
systems biology approach, researchers deliberately move away from the classic reductionist manner of looking at molecules in isolation to study biological
systems in their entirety.
The research missions include a microbiology study of yeast, a fruit fly study designed and built
by students, a plant
biology investigation and the maiden voyage of NASA's new rodent research
system.
So it could be RNA or DNA like we have in modern
biology or it could be some related kind of material; and we are also thinking about some kind of cell envelope or cell membrane — not that that's necessarily the very first way Darwinian
systems began, but at some point they had to transition into a
system more related to modern
biology where cells are all bounded
by membranes — so we're thinking about how to assemble these two components and get them to interact with each other.
«We continue to be fascinated
by the functions of bacterial CRISPR
systems and how mechanistic understanding leads to opportunities for new technologies,» said Doudna, a professor of molecular and cell
biology and of chemistry and a Howard Hughes Medical Institute investigator.
The research group, led
by Erika Matunis, Ph.D., a professor of cell
biology at the Johns Hopkins University School of Medicine, has been using the fruit fly as a model living
system in which to study stem cells in their natural state.
«Earlier studies have shown that vitamin E can help regulate the aging body's immune
system, but our present research is the first study to demonstrate that dietary vitamin E regulates neutrophil entry into the lungs in mice, and so dramatically reduces inflammation, and helps fight off infection
by this common type of bacteria,» said first author Elsa N. Bou Ghanem, Ph.D., postdoctoral scholar in the department of molecular
biology and microbiology at Tufts University School of Medicine (TUSM).
Pedler, a marine
biology graduate student at Scripps, spent several years working with Scripps marine microbiologist Azam and chemical oceanographer Aluwihare in designing a
system that would precisely measure carbon consumption
by individual bacterial species.
We use a combination of genomics,
systems biology, biochemistry, bioinformatics and molecular
biology to investigate the networks formed
by RNA binding proteins, miRNAs and their target genes and evaluate their impact on biological processes, cancer and disease states.
Jaleel Miyan, a neurobiologist at the University of Manchester in England who did not participate in this research, stressed the significance of this finding
by characterizing the analogy with the lymphatic
system as inadequate: «What they have demonstrated is actually far more extensive and important to CSF [cerebrospinal fluid]
biology.»
To achieve such integration, Tara Oceans is driven
by researchers with expertise in biological and physical oceanography, ecology, microbiology, systematics, molecular, cellular and
systems biology, bioinformatics, data management, and modeling.
This technology has begun to revolutionize
biology by providing a new application for functional genomics in experimental
systems.
My goal is to contribute to the resolution of this important problem
by bringing to bear recent advances in human genetics and integrative genomics and translating them in a mechanistic,
systems - level understanding of disease that is rooted in human
biology but also actionable from a drug development perspective.
Caribou's technologies are based on research into the
biology of CRISPR - Cas
systems carried out
by the Doudna Lab at the University of California, Berkeley, and their collaborators.
We have been studying endocytosis in a broader,
systems perspective,
by combining quantitative imaging, genome - wide RNAi screens with
systems biology analysis.
This two - volume reference integrates this exciting area of
biology, combining the prerequisites for a general understanding of adult and embryonic stem cells, the tools, methods, and experimental protocols needed to study and characterize stem cells and progenitor populations, as well as a presentation
by the world's experts of what is currently known about each specific organ
system.
Sex differences describe
biology - linked differences between women and men, which are caused
by differences in sex chromosomes, sex - specific gene expression of autosomes, sex hormones, and their effects on organ
systems (Figure 1)(1, 3).
Further, none of these previous studies took a
systems biology approach
by examining covariation across GE patterns (versus specific gene pathways).
Approaches successful in other
systems, such as modeling signal transduction and synthetic
biology methodologies [32] could improve future generations of detector plants
by enhancing signal transmission and providing means to deal with biological «noise».
Systems -
biology studies have mapped out aging - related genetic networks, but these top - down approaches are complicated
by the difficulty of distinguishing correlations from causality.
Systems biology aims to study complex cellular systems by systematically stimulating them, monitoring cellular responses, formulating mathematical and computational models to understand the data, and proposing new experiments to refine these
Systems biology aims to study complex cellular
systems by systematically stimulating them, monitoring cellular responses, formulating mathematical and computational models to understand the data, and proposing new experiments to refine these
systems by systematically stimulating them, monitoring cellular responses, formulating mathematical and computational models to understand the data, and proposing new experiments to refine these models.
The AgedBrainSYSBIO consortium is coordinated
by the French National Institute for health and medical research (Inserm, Prof. Michel Simonneau) and brings together an scientists with internationally recognized expertise in
systems biology of the synapse and four small to medium size enterprises (SMEs) with a leading role in the project to assure the innovation potential and translation of project results to clinical application.
In Entamoeba invadens, stage conversion can be induced, but its utility as a model
system to study developmental
biology has been limited
by a lack of genomic resources.
The stellar classification
system is taxonomic, based on type specimens, similar to classification of species in
biology: The categories are defined
by one or more standard stars for each category and sub-category, with an associated description of the distinguishing features.
Our global aim is to reconstruct such networks
by focusing on individual components (cells, soluble factors, membrane receptors), or
by integrating multiple components using
systems biology and modeling.
SYSCOL —
Systems biology of colorectal cancer — is a collaborative project financed
by the EU Framework Programme 7.
Stephen Alexander, UK - Cannabinoid receptors, transporters, endocannabinoid turnover, hydrogen sulphide turnover Arthur Christopoulos, Australia (GPCRs Liaison)- G protein - coupled receptors; analytical pharmacology; allosteric modulation; biased agonism; drug discovery; neuropharmacology John Cidlowski, USA (NHRs Liaison)- Glucocorticoid receptor signaling; apoptosis and the immune
system Anthony P. Davenport, UK (Chair Evolving Pharmacology, GPCRs Liaison) Doriano Fabbro, Switzerland - Kinases and their
biology, kinase inhibitors, drug discovery, pharmacology of drugs (kinase inhibitors) in the indication oncology,
biology of oncology Kozo Kaibuchi, Japan Yoshikatsu Kanai, Japan - Transporters, amino acid signals, epithelial function, cancer
biology Francesca Levi - Schaffer, Israel - eosinophils and mast cells as effector cells in allergic inflammation: characterization of new receptors / ligands, hypoxia / angiogenesis and eosinophils, asthma, atopic dermatitis, allergic rhinitis, immunopharmacological modulation of allergic diseases
by bispecific recombinant antibodies, bacteria interactions with eosinophils and mast cells, the allergic effector unit, mast cell derived tumors: new antibody based treatment, the allergic inflammation and the resolvome, non IgE - mediated mast cell activation in diseases Eliot H. Ohlstein, USA (Editor)- Drug discovery and development, urogenital
biology, cardiovascular / metabolic medicine John A. Peters, UK (LGICs Liaison) Alex Phipps, UK - Oncology, Clinical Pharmacology, Biologics and Immunotherapy Joerg Striessnig, Austria (VGICs Liaison)- Physiology, pharmacology and pathophysiological role of voltage-gated calcium channels