-- Combining the detailed information from existing single
cell analysis with our in situ sequencing method can be powerful and find great use in both research and diagnostics, says Mats Nilsson.
Not exact matches
I won't reveal yet who my favorites are, but I will say that these young scientist - founders came up
with very creative solutions for preventing infections in some common surgeries, tackling resistance in targeted antibody drugs, improving gene vectors for
cell therapies, helping the vision - impaired «see» faces and better read their environments, imaging hard - to - see spots in the lungs and other organs, improving genetic risk
analysis, and expediting the logistical operations of hospitals.
Our proprietary algorithm can predict
cells with high genomic instability and identifies an HRD phenotype based on image
analysis alone.
With proper repetitions, negative controls and statistical
analyses, the effects of carrageenan exposure on human
cells can be better understood.
- A Game of Hypothesizing, Dean Interpreting Data - Quantitative
Analysis of Mixtures, Schwartz Defining Operationally - Biotic Community, Menhusen
Cells and Magnification, Menhusen Reading Activity - Formulating Hypothesis, Hebeisen Reading Exercise - Oersted's Experiment, Schwartz Formulating Hypotheses - Levers, Schwartz North by Compass, North by Shadow, Dennis Controlling Variables - Human Heart Rate, Phillips Effect of Practice on Memorization, Forgetting and Relearning, Mayor Learning About Line Graphs I, II and III, Dean Controlling Variables - Chemical Reactions, Livermore Chances Are, Hebeisen Interpreting Data - Animal Behavior, Menhusen Working
with Solutions, Dean Defining Operationally - Inertia and Mass Stamp Out Trash, Hebeisen Interpreting Data Module - A Limited Earth: An Unlimited Population?
An in - depth genetic
analysis, performed
with the participation of graduate students Tal Lupo and Lihee Asaf, pointed to a gene called WNT5B, which was revealed to be the factor prompting stem
cells to differentiate into lymphatic
cells.
Analysis showed that within the moss protonema
cells, more that 85 % of the lead had accumulated in the
cell walls,
with smaller amounts being found in organelle membranes and inside the chloroplasts where photosynthesis occurs.
In cancer research, our goal is to be able to start
with a sample of human tissue, extract many
cells of interest, and perform genetic
analysis upon each of them separately.
Eager to sort through the pile of curriculum vitae's on his desk, Rudnicki is particularly looking for molecular geneticists working on different stem
cell systems; scientists
with genomics bents like proteomics, microarray
analysis, and bioinformatics; and a couple of clinician scientists.
Based on the little eyewitness information they could collect, Charlottesville police in 2003 started approaching dark - skinned men
with a request for what some call get - lucky swabs — swipings from the inner cheeks of nonsuspects to collect
cells for DNA
analysis.
The NB activity in Alberta is far ranging,
with such research as self - assembled nanostructures (M. J. Brett), single -
cell cancer
analysis (L. M. Pilarski), computational modeling (D. Wishart), micro-total
analysis systems or lab on a chip (D. J. Harrison),
cell identification and manipulation (K. Kaler), and microsystems and medical diagnostics (Backhouse).
«Our
analysis revealed that the differences between tame and aggressive foxes may lie in
cells in the anterior pituitary gland, which can change their shapes to communicate
with one another about when it's time to release stress hormones,» Hekman said.
Biochemist Radhey Gupta of McMaster University in Canada proposes that a bacterium and an archaean fused to form the first eukaryote, based on his
analysis of a pair of slow - changing genes found in what may be one of the oldest
cells with a nucleus, Giardia lamblia.
What the rover can do is detect the building blocks for those
cells with its portable chemistry lab, Sample
Analysis at Mars.
Their
analysis focused on the substantia nigra, a brain structure where Parkinson's disease kills neurons that use the chemical dopamine to communicate
with other
cells.
Isoflavones have been shown to slow the growth of breast cancer
cells in laboratory studies, and epidemiological
analyses in East Asian women
with breast cancer found links between higher isoflavone intake and reduced mortality.
The new platform processes hundreds to tens of thousands of
cells per day, providing scalable, sensitive, single -
cell sequencing
with simple yet powerful data
analysis.
For this
analysis, 605 patients
with newly diagnosed multiple myeloma and treated
with continuous lenalidomide (brand name Revlimid) following autologous stem
cell transplant were compared to 604 patients who were treated
with placebo or no maintenance.
«Lenalidomide maintenance following autologous stem
cell transplant can now be considered a standard of care for people
with multiple myeloma,» says Dr. McCarthy, senior author on the meta -
analysis and Principal Investigator of the U.S. study, CALGB (Alliance) 100104.
The tool acts
with surgical precision to replace only abundances that have most likely dropped out and can be used in any type of single -
cell gene - expression
analysis.
The finding, reported by a Stand Up to Cancer - Prostate Cancer Foundation Dream Team in the May 21 edition of the journal
Cell, is based on an
analysis of tumor samples from 150 men
with metastatic prostate cancer that no longer responded to standard hormone - blocking therapy.
Two months after therapy, tissue
analysis showed less scarring and higher levels of regenerative agents such as fibroblast growth factor — which accelerate healing — in rats treated
with SIS plus stem
cells compared
with those treated
with SIS alone.
Spearheaded by first author Christopher McNair, PhD, a graduate student in the laboratory of Dr. Knudsen, the study undertook an extensive
analysis of tumor samples and
cell - free DNA samples from patients
with advanced, lethal - stage prostate cancer.
Labs have started tackling the problem
with a tool called single -
cell transcriptome
analysis, which gives readouts of all the genes that are active in individual
cells.
To unravel the complex signaling pathway map, the scientists used their own findings from the
analysis of factors regulated up or down in the interplay between tissue and stem
cells, linking them
with the signaling pathways described in existing literature.
The
analysis of charges at more than 150 California hospitals looked at blood tests that are often required of patients, such as lipid panel, basic metabolic panel, and complete blood
cell count
with differential white
cell count.
Protein immunoblot and histochemical
analysis with antiserum to type I NO synthase suggest that the formation of NO in pancreatic B
cells is catalyzed by an NADPH -(reduced form of nicotinamide adenine dinucleotide phosphate), Ca2 + / calmodulin - dependent type I NO synthase of about 150 kilodaltons.
With current techniques it is not easy to make comparative analysis of influenza viruses with single mutations in their genomes, and it is extremely difficult to identify factors that limit the reassortment process between two influenza genomes that have infected the same c
With current techniques it is not easy to make comparative
analysis of influenza viruses
with single mutations in their genomes, and it is extremely difficult to identify factors that limit the reassortment process between two influenza genomes that have infected the same c
with single mutations in their genomes, and it is extremely difficult to identify factors that limit the reassortment process between two influenza genomes that have infected the same
cell.
«Adipose
analysis on microfluidic chips: Platform works
with minute quantities of liquid to grow
cells and study their development.»
Intravital two - photon bone imaging is superior compared
with conventional
analyses of the shape and form of a tissue because it enables two - dimensional scanning in bone in a focal plane to observe
cell shapes and the appearance of mOBs and mOCs in the body.
The profile of CD4 - TEMRA was highly heterogeneous across donors,
with four distinct clusters identified by the single -
cell analysis.
Single -
cell differential gene expression
analysis revealed a spectrum of known transcripts, including several linked to cytotoxic and costimulatory function that are expressed at higher levels in the TEMRA (effector memory T
cells expressing CD45RA) subset, which is highly enriched for CD4 - CTLs, compared
with CD4 + T
cells in the central memory (TCM) and effector memory (TEM) subsets.
«By combining the genetic
analysis of a small population of immune
cells from healthy skin
with functional experiments we were able to define two subgroups of memory immune
cell and in detail decipher / dissect how these
cells behave in healthy and inflamed skin,» explains Liv Eidsmo, researcher at Karolinska Institutet's Department of Medicine.
Simultaneous T
cell antigen receptor (TCR)
analysis in single
cells and bulk subsets revealed that CD4 - TEMRA
cells show marked clonal expansion compared
with TCM and TEM
cells and that most of CD4 - TEMRA were dengue virus (DENV)-- specific in donors
with previous DENV infection.
Visualization of the 3 - D microscopy data together
with the
analysis results is a key step to measure and ultimately understand what drives these
cells.»
Immunofluorescence
analysis of prostate cancer
cells treated
with 15mM flutamide, 35?
He has worked in the biotech industry as a research scientist for over 11 years
with a focus on emerging technologies including gene targeting in mice, molecular
analysis of transgenes using GFP variants at the single
cell level, and developing flow cytometry reagent kits to speed up assay development time for researchers.
Analyses of RV144 volunteers revealed that particular vaccine - induced immune responses, including production of certain antiviral antibodies and CD4 + T
cell responses to HIV's outer shell, or envelope, correlate
with reduced HIV infection.
The
analysis performed revealed that many variations in immune
cell function triggered by chronic HIV infection are associated
with high levels of bNAbs.
Based on an
analysis of existing evidence, published in an opinion article in the Nature Reviews Clinical Oncology journal on January 20, Dr. Narod argues that to achieve a cure, rather than simply delay progression or reoccurrence of the disease, women should be first treated
with aggressive surgery to remove all clinically - detectable cancer
cells, followed by targeted chemotherapy to the abdomen (intraperitoneal chemotherapy).
Adds Liu: «
With metastatic cancers accounting for around 90 % of deaths from solid tumors, the hope is that one day a device that can enable the
analysis of single tumor
cells circulating in the blood could make a big difference in early diagnosis, detection and monitoring of numerous types of cancer, without invasive biopsies.»
In the study,
analysis of patient samples demonstrated that high LSC17 scores meant poor outcomes
with current standard treatment, even for patients who had undergone allogeneic stem
cell transplantation.
In the lab, the scientific team used an approach that combined functional RNAi
analysis with gene expression
analysis in breast cancer - derived
cell lines and in human breast cancers replicated in mice.
The role of rebiopsy and repeat
analysis in the setting of post-treatment relapse, along
with testing of blood samples for mutations in circulating tumor
cells,
cell free tumor DNA, or exosomes will be considered.
Using a very sensitive DNA
analysis technique that can also be employed when only very small amounts of DNA from old tissue are available, the researchers could compare the two current
cell lines
with the tumor from which the
cell line was established.
A series of biological
analyses of the mice
with Tim - 1 and immune
cells isolated from human donors showed that Ebola virus directly binds to T -
cells through Tim - 1 protein binding and causes massive inflammation that thwarts the immune system.
Their
analysis showed that the diversity of T -
cell receptors decreased among samples of T -
cells taken closer to the tumor, compared
with farther away.
A University of Colorado Cancer Center study published in the journal Oncogene used next - generation sequencing technologies to perform the most detailed DNA - based
analysis to date of 25 commonly used bladder cancer
cell lines, allowing researchers to match patient tumors
with their closest genetic
cell line match, and demonstrated genetic alterations that may make
cells more or less sensitive to common therapies.
The Norwegian
analysis was done after researchers at Harvard University found these effects of the medicines in animal tests and in experiments
with brain
cells in the lab.
«Our combined
analysis of
cell - free DNA and white blood
cell DNA allows for identification of tumor DNA
with much higher sensitivity, and deep sequencing also helps us find those rare tumor DNA fragments.»