Coalescent analysis revealed recent emergence of the SCs and there was evidence of natural capsule switching in the absence of vaccine induced selection pressure.
A populationwide
coalescent analysis of Icelandic matrilineal and patrilineal genealogies: Evidence for a faster evolutionary rate of mtDNA lineages than Y chromosomes.
We also developed a statistical binning approach that improves multispecies
coalescent analyses for handling gene trees with low phylogenetic signal to infer a species tree (SM5)(58).
Not exact matches
To determine if ILS affected the concatenated tree
analyses, we explored whether a multispecies
coalescent model leads to a different tree topology.
We first performed a
coalescent - based G - PhoCS25
analysis of the model in Fig. 5b to obtain estimates of divergence time and population diversity (Supplementary Table 15 and Supplementary Note 12).