«This also raises the possibility that mild mutations in
cohesin genes may be the cause of some fraction of congenital heart defects in the general population,» she says.
His research currently focuses on determining the mechanisms and consequences of
cohesin gene inactivation in human cancer.
Not exact matches
Mutations in the
genes encoding proteins that regulate
cohesin and
cohesin protein itself cause the developmental disorder Cornelia de Lange syndrome (CdLS).
Cohesin controls
gene expression and chromatin structure, as well as enabling chromosomes to separate correctly immediately prior to cell division.
Research coordinated by Osaka University has now shown that the nuclear protein complex
cohesin must be expressed at sufficient levels in the early mouse brain to control
gene regulation and allow development of healthy neuronal networks and behavioral characteristics.
«We also found that reduced
cohesin led to changes in the expression of
genes involved in nerve cell development and the response to an immune signaling protein,» corresponding author Toshihide Yamashita says.
Unless sufficient
cohesin was present in the developing mouse brain, the researchers showed that the regulation of a number of
genes was disrupted, leading to neuronal defects and increased anxiety.
In previous studies, researchers proved in mice that
genes of the meiotic
cohesin complex produce various degrees of infertility in mice.
CSIC researcher adds: «We have confirmed that mutation is found in both copies of the
gene, one inherited from the father and the other one inherited from the mother, in the four women affected by the disease, causing an absolute absence of STAG3 protein and meiotic
cohesin complex in these women.
«By knowing which of the
Cohesin / CTCF bound sites are coming together in physical proximity, we started to go from a linear view of the genome to sets of looping interactions, which led us to these domains, these super enhancer domains, where
gene expression enhancement is contained within the loop,» says Jill Dowen, a postdoctoral researcher in Young's lab.
In the ESCs they studied, the scientists identified 197
Cohesin / CTCF - flanked loops that contain active
genes and enhancers, and 349 loops that contain repressed
genes.
Hnisz, also a postdoctoral researcher in Young's lab, likens the loops to «goody bags», with
Cohesin and CTCF acting as the purse strings to create a DNA loop that cradles proteins enhancing or repressing
gene expression.
This means that
cohesin has at least the potential to influence a whole bunch of other chromosomal events, like DNA replication,
gene expression and DNA topology.
Our results have revealed that although condensin and
cohesin bind to the same
gene loci, they direct different association networks (Figure).
These studies demonstrate that the two important protein complexes, condensin and
cohesin, are both essential for the assembly of the functional genome architecture, but their roles in the 3D genome organization (
gene contacts and topological domain organization) are significantly different.
In the figure: ChIA - PET genomic analyses successfully mapped condensin (left) and
cohesin (right)- mediated
gene contacts throughout the fission yeast genome.