The data is manually curated, which is more accurate at identifying splice variants, pseudogenes poly (A) features, non-coding and
complex gene structures and arrangements than current automated methods.
Not exact matches
EPFL biologists and geneticists have uncovered how the circadian clock orchestrates the 24 - hour cycle of
gene expression by regulating the
structure of chromatin, the tightly wound DNA - protein
complex of the cell.
These suggest a
complex history that may represent early
gene flow across Eurasia or an early population
structure that eventually led to Europeans and Asians.
The study identifies a wide set of
genes — previously associated with
complex structures in higher animals — which were supposedly absent in sponges.
The 3 angstrom resolution crystal
structure of the Escherichia coli catabolite
gene activator protein (CAP)
complexed with a 30 - base pair DNA sequence shows that the DNA is bent by 90 degrees.
Rutgers University scientists have discovered the three - dimensional
structure of a
gene - specific transcription activation
complex, providing the first structural and mechanistic description of the process cells use to turn on, or activate, specific
genes in response to changes in cell type, developmental state and environment.
Bioinformatic approaches to the analysis of genetic variability and
complex genotype - phenotype relationships will moreover include
gene sequence and database analyses, measures of association of haplotypes / genotypes with phenotype, clustering procedures, neuronal networks, fuzzy and other techniques in pattern recognition, similarity measures for discrete patterns (e.g.,
gene sequences,
structures, functions), logistic regression methods, and a spectrum of other techniques.
«Our hypothesis is that
structures conserved in RNA are like a common template for regulating
gene expression in mammals — and that this could even be extrapolated to vertebrates and less
complex organisms.»
«We found that Asgard archaea share many
genes uniquely with eukaryotes, including several
genes that are involved in the formation of
structures that give eukaryotic cells their
complex character.
By probing the three dimensional
structure of this protein
complex, called RNA - Induced Initiation of Transcriptional
gene Silencing (RITS), scientists from Cold Spring Harbor Laboratory (CSHL) and their collaborators at St. Jude's Research Hospital have discovered new details of how its various parts or «domains» contribute to heterochromatin assembly and
gene silencing.
As we have done to elucidate
complex diseases, 6 for each projection on the blood causal network
structure, we identified the largest connected subnetworks comprising
genes directly connected to the projected module
genes, resulting in the identification of relaxation - and meditation - specific subnetworks (Figure 3).
Crystal
structure of a Cas9 in
complex with an RNA guide and a stretch of target DNAWIKIMEDIA, H. NISHIMASU ET AL.. A team of researchers at the Gladstone Institutes in San Francisco, California, has used a version of CRISPR
gene editing known as CRISPR interference (CRISPRi) to reversibly and accurately suppress
gene expression in induced pluripotent stem cells (iPSCs) and derivative T cells and heart cells, according to a study published in Cell Stem Cell today (March 10).
Talks will discuss the origination of novel cell type
gene regulatory networks, and cover the latest research into the evolution of cell type functional modules, such as protein
complexes and larger macromolecular
structures.
We show that most
genes encoding olfactory and vomeronasal receptors have
complex, multi-exonic
structures that generate different isoforms.
These laboratories are complemented by several additional laboratories: one that is focused on computational
structure prediction and design (Phil Bradley), one that conducts solution - based protein mapping studies of large
complexes involved in
gene transcription (Steve Hahn) and a third that conducts drug target validation and drug screening studies (Julian Simon).
This surprising genome
structure is generated and reinforced by two essential protein
complexes that bridge the loops and contribute to proper
gene regulation.
The classic data of bioinformatics include DNA sequences of
genes or full genomes; amino acid sequences of proteins; and three - dimensional
structures of proteins, nucleic acids and protein — nucleic acid
complexes.
Structure is controlled by
genes that affect bones, muscles, tendons, ligaments, and growth rate, and health depends on
gene interaction as simple as that governing progressive retinal atrophy (the dog either has it or he doesn't; there's no halfway) or as
complex as that influencing various autoimmune diseases, seizures, or various circulatory defects.
The
gene product's precise role is not currently understood but it is thought to anchor regulatory
complexes at the photoreceptor connecting cilium, which acts as a bridge between the inner and outer segments of photoreceptor cells [43] as well as having functions in disk morphogenesis [42] and in the
structure of the ciliary axoneme [44].