Sentences with phrase «computational analyses q.chang»
One of the most important points made in these papers concerning the reproducibility of computational analyses is that having the tools and techniques in hand isn't nearly enough by itself to get the job done..
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We seek a highly creative and interactive scholar whose research and teaching interests are focused on innovative approaches for theoretical, empirical, and computational analyses in Earth and Environmental Sciences and whose research addresses dynamics at any scale - from individual organisms to the entire globe.
She joined 23andMe in 2007 and manages the 23andMe research team, which is responsible for consumer health and ancestry research and development, academic and industry collaborations, computational analyses for therapeutics, and new research methods and tools development.
Most of her research uses Drosophila as a model, combing whole - genome experimental and computational analyses.
At Johns Hopkins University and Washington University in St. Louis, Dr. Lin was part of one of the first clinical genomics laboratories to lead the computational analyses of the first ever genome sequencing studies (including breast, colorectal, glioblastoma, medulloblastoma, melanoma, and pancreatic).
«Our experimental and computational analyses could enable quantitative prediction for any gene, pathway or organism.»
We are active members of the Genotype Tissue Expression (GTEx) project, and use the GTEx data for most of our computational analyses.
Results: Benefiting from the recently sequenced genome of the model sulfate - reducing bacterium (SRB), Desulfovibrio vulgaris, microbiologist Weiwen Zhang and a team of scientists at Pacific Northwest National Laboratory (PNNL) are applying a suite of post-genomics technologies, including microarray, proteomic, and computational analyses, to obtain a broader understanding of D. vulgaris» metabolism.
Mats Nilsson demonstrated a unique technology to reveal cells harboring specific mutations in tissue sections, while Ruedi Aebersold held an impressive lecture, illustrating about how powerful mass spectrometry provides a basis for for computational analyses, commented moderator Ulf Landegren.
UNISI hosts a unit of Systems Biology and Bioinformatics, equipped with the necessary infrastructure for data storage and high - performance computational analyses.
The USAMRIID team was able to extend computational analyses that they had been using to track Ebola to the powerful dataset provided by the Broad and CDC.
Evan Paull, a graduate student in Stuart's lab at UC Santa Cruz (now at Columbia University), led the computational analyses, which involved integrating the phosphoproteomic data with genomic and gene expression datasets to provide a unified view of the activated signaling pathways in late stage prostate cancer.
This single cell transcriptome analysis followed by computational analyses enabled the team to identify the gene expression profiles of cells in the process of changing from ES cells to 2CLCs.
To infer the functional effects of these differences, they ran multiple computational analyses, including comparisons to massive databases of known gene functions and of mice in which genes are artificially deactivated.
Thus, non-deterministic (or non-predictable) outcomes must occur for all dynamical systems if they are examined at a sufficiently refined scale of computational analysis.8
Computational analysis of Sloan's prodigious data set has uncovered evidence of some of the earliest known astronomical objects, determined that most large galaxies harbor supermassive black holes, and even mapped out the three - dimensional structure of the local universe.
After working on the mathematics, computational analysis and design of his device, Dr Wang personally constructed his full - size, ready - to - test prototype (pictured right)-- a demonstration of practical engineering skills that impressed his supervisor Professor Ball.
Zweben and co-authors performed computational analysis of the data from the camera, determining the correlations between different regions of the frames as the turbulent eddies moved through them.
A team of scientists, led by Jill L. Maron, MD, MPH, Associate Professor of Pediatrics at Tufts Medical Center, reports that by combining gene amplification techniques with advanced computational analysis tools they were able to identify and validate salivary biomarkers to predict oral feeding readiness in preterm infants.
Careful attention to phenotyping diseases, facilitated by our knowledge of the human genome and computational analysis, has allowed observant physicians and physician - scientists to identify and categorize diseases in a manner that has informed basic science, given it new contexts, and in many instances provided important new directions for investigation.
The tested values matched those determined by computational analysis using the new formulas, Ren said.
«We synthesized a new compound, demonstrated its effectiveness with biological data, and learned more about its interactions with proteins through X-ray crystallography and computational analysis,» says UConn associate professor of chemistry José Gascón, a specialist in quantum and molecular mechanics.
But until the advent of sophisticated tools for genetic and computational analysis, scientists had no way of studying the genetic machinery that enables regeneration.
This is something you might want to consider building your strength in — having the ability to do sophisticated computational analysis of large data sets and figure out what they are really telling you — because it is going to be essential in terms of fundable research.
The computational analysis showed remarkable similar results to those in the wind tunnel: backgrounds scents significantly modified the representation of the flower odor, and altered the neural perception of the flower.
Planetary scientist Will Grundy of Lowell Observatory in Flagstaff, Ariz., and colleagues used images of Charon taken by the New Horizons spacecraft and computational analysis to demonstrate that methane from Pluto is a reasonable culprit for Charon's rust - colored pole.
The researchers also extracted DNA from 118 species of marine fish and conducted a computational analysis to determine the relationships among them.
This is also the first attempt to create a representative and balanced dataset of folk and traditional music around the world for computational analysis.
Finite element modelling, the same technique used to design hip joints and bridges, was used to perform a computational analysis of the strength of the jaws.
Contact: 508-289-7139; [email protected] WOODS HOLE, Mass. — Using a simple «mirror trick» and not - so - simple computational analysis, scientists affiliated with the Marine Biological Laboratory (MBL) have considerably improved the speed, efficiency, and resolution of a light - sheet microscope, with broad applications for enhanced imaging of live cells and embryos.
X-ray studies at the Department of Energy's SLAC National Accelerator Laboratory, combined with Stanford biological studies and computational analysis, revealed remarkable similarities in the structure of binding sites, which allow a given T cell to recognize many different invaders that provoke an immune response.
More specifically, we use large - scale data acquisition and quantitative modelling of phenotypes and molecular profiles, systematic perturbations (such as drugs or high - throughput genetics) and computational analysis of non-linear, epistatic interaction networks.
The system — a computational analysis tool that assigns behavior to individual frames of video — allowed for the sensitive, effective and efficient scrutiny of millions of video frames.
«We synthesized a new compound, demonstrated its effectiveness with biological data, and learned more about its interactions with proteins through X-ray crystallography and computational analysis.»
He is interested in elucidating mechanisms of human disease by exploring the functional effects of genetic variation through computational analysis of «- omic» sequencing data.
We're looking for a postdoc to work on computational analysis of disease - associated and other functional variation in human genomes!
A computational analysis of the sequence predicts 218 protein - coding genes, 11 tRNAs, and 17 transposable element sequences.
In a series of steps combining 7T MRI, computational analysis and painstaking laboratory staining techniques, the scientists probed slabs of tissue taken from several places within the brains of each of five Alzheimer's and five control brain specimens.
Our work combines computational analysis of high - throughput sequencing data, population genetics, and experimental work.We focus in particular on studying genetic effects on the transcriptome traits, which has further applications in other traits at the cellular and individual level.
Braving culture shock and a formidable language barrier, Hur joined the lab of Santa Barbara organic chemist Thomas Bruice, known for his work on the computational analysis of enzyme reactions.
We are interested in genome - wide computational analysis and comparative genomics focusing on species biology and natural history.
Nick Owens, a post doc in Mike Gilchrist's lab, who developed the computational analysis, said: «This study improves our ability to understand the way gene expression changes with time, and from this we gain insight into the logic of how gene expression is regulated.
Under the supervision of Snijders, they led the programming effort and computational analysis that helped identify the relevant genes and that formed the basis of the scoring system.
High - content superresolution microscopy and a computational analysis framework enables the acquisition of large datasets of structures with powerful statistics.
The Gladstone Data Science Training Program was started in 2018 to provide trainees with learning opportunities and hands - on workshops to improve their skills in bioinformatics and computational analysis.
During his PhD he worked on three main projects: digital scanned laser light sheet fluorescence microscopy (with Dr. Ernst Stelzer), the in toto reconstruction of zebrafish embryogenesis (with Dr. Jochen Wittbrodt), and the computational analysis of the evolution of the yeast genome architecture (with Dr. Michael Knop).
Analysis and interpretation of data (e.g., statistical analysis, biostatistics, computational analysis): D. Quigley, J.J. Alumkal, A.W. Wyatt, V. Kothari, P. Lloyd, W. Kim, M. Annala, R. Das, M. Diolaiti, C. Pritchard, G. Thomas, S. Tomlins, K. Knudsen, C. Ryan, T.M. Beer, A. Ashworth, F.Y. Feng
Computational analysis of core promoters in the Drosophila genome U. Ohler, G. Liao, H. Niemann and G.M. Rubin Genome Biology (2002) 3 (12): research0087.1 - 0087.12 Download entire paper in pdf format
This is an exciting and rapidly evolving field, where clustering, pseudotime inference, branching inference and gene - level analyses are particularly informative areas of computational analysis.
Here we provide an overview of different experimental protocols and the most popular methods for facilitating the computational analysis.