As a recognized cornerstone for the genomics research community, AGBT provides an outstanding forum for exchanging information about the latest advances in DNA sequencing technologies, experimental and analytical approaches
for genomic studies, and their myriad applications.
AGBT provides a forum for exchanging information about the latest advances in DNA sequencing technologies, experimental and analytical approaches
for genomic studies, and their myriad applications.
$ 25M was committed by NHGRI to its Large - Scale Sequencing and Analysis Centers (LSACs)
for genomic studies.
Wolf's team measures the young birds» wing length and color and collects blood samples
for genomic studies before returning them to the nest.
Not exact matches
But it has been disappointing in that the kind of genetic variation it detects has turned out to explain surprisingly little of the genetic links to most diseases... One issue of debate among researchers is whether, despite the prospect of diminishing returns, to continue with the genomewide
studies, which cost many millions of dollars apiece, or switch to a new approach like decoding the entire genomes of individual patients.The unexpected impasse also affects companies that offer personal
genomic information and that had assumed they could inform customers of their genetic risk
for common diseases, based on researchers» discoveries...
One such example is a paper called «Of woods and webs: possible alternatives to the tree of life
for studying genomic fluidity in E. coli».
The work helps explain a biological mystery and could open scientific doors to
studies of novel treatments
for neurological disease, said lead researcher Jason Slot, an assistant professor of fungal evolutionary
genomics at The Ohio State University.
«Discovery of this mutation adds to the growing list of insights gained from
genomic studies that can be used to develop new treatments and customize existing treatments
for type 2 diabetes and related metabolic disorders,» Dr. Damcott says.
EPFL scientists have carried out a
genomic and evolutionary
study of a large and enigmatic family of human proteins, to demonstrate that it is responsible
for harnessing the millions of transposable elements in the human genome.
Among those are grants
for very high - throughput
genomics and proteomics
studies.
«We found that Amish people with this mutation have defects in fat storage, increased fat in the liver, high triglycerides, low «good» (HDL) cholesterol, insulin resistance and increased risk of developing type 2 diabetes,» says the
study's senior author, Coleen M. Damcott, Ph.D., an assistant professor of medicine in the Division of Endocrinology, Diabetes and Nutrition and member of the Program
for Personalized and
Genomic Medicine at the University of Maryland School of Medicine.
«We now hope to design larger clinical
studies to treat patients» tumors harboring these novel
genomic aberrations to further explore the precise extent of clinical benefit
for patients with primary or advanced cholangiocarcinoma.»
«The
study results elucidate the molecular mechanisms underlying disease progression in multiple sclerosis models, providing a basis
for future clinical trials to determine safety and efficacy of these chemical agents in humans with demyelinating disorders,» says Patrizia Casaccia, MD, PhD, Professor of Neuroscience, Genetics and
Genomic Sciences at Mount Sinai and senior author of the
study.
I was
studying a handful of families in which people had inherited a recessive disease affecting platelet aggregation, looking
for mutations in their
genomic DNA.
Using
genomic analysis to
study cancer in dogs can help develop new therapies
for humans with cancer, according to a proof - of - concept
study led by the National Cancer Institute (NCI) and the Translational Genomics Research Institute (TGen).
As costs come down and methods become more standardized, experts in the field expect single - cell sequencing to become the new model
for both transcriptomic and
genomic studies.
The
study has involved the participation of groups from the «Centro Nacional de Investigaciones Oncológicas,» the «Hospital Clínico de Barcelona - IDIBAPS - UB,» and the Centre
for Genomic Regulation.
The
study's principal investigator, Dr Riccardo Marioni, from The University of Edinburgh's Centre
for Genomic and Experimental Medicine, said: «We are still a long way from making an accurate prediction
for an individual's hair loss pattern.
Google
Genomics,
for instance, is
studying the application of cloud computing to
genomics, and Calico has signed a slew of collaborations with companies and academic institutes.
Ehrhardt says he believes that the decline in NIH - funded
studies can be traced to two things: Flat NIH funding (the 2014 budget was 14 percent less than in 2006, after adjusting
for inflation) and greater competition
for these limited dollars from other, relatively new research areas such as
genomic research or personalized medicine
studies.
In a
study that included children and young adults with relapsed or refractory cancer, incorporation of integrative clinical
genomic sequencing data into clinical management was feasible, revealed potentially actionable findings in nearly half of the patients, and was associated with change in treatment and family genetics counseling
for a small proportion of patients, according to a
study in the September 1 issue of JAMA.
A genome - wide association
study (GWAS) of 1570 Africans identified variants significantly associated with skin pigmentation, which clustered in four
genomic regions that together account
for almost 30 % of the phenotypic variation.
In the current
study,
for example, they utilized
genomic information from hundreds of microbial species commonly found in humans to create computer models of nutrient and energy metabolism.
A chromosome - specific BAC library was used to assemble 82 % of the chromosome into 1036 contigs that were anchored with 1443 molecular markers, providing a major resource
for genetic and
genomic studies.
He stayed on
for a Ph.D., specialising in bioinformatics and the design of computer tools
for the
study of evolutionary
genomics.
The
study also indicated that
genomic diversity may also have useful clinical applications
for predicting tumor invasion, metastasis and poor survival in patients.
Xin Liu, Project Manager from BGI, said «This
study not only generates valuable
genomic resource including additional wild reference genome, genome - wide variations
for further
studies and breeding applications on cucumber, but also gave us a better picture about how the cucumber genome evolved during domestication.
I was riding high on a series of recent academic honors
for my work
studying toxigenic molds and was looking forward to spending a sabbatical leave at The Institute
for Genomic Research, now the J. Craig Venter Institute, in Maryland.
Dr Sid Banka from the Manchester Centre
for Genomic Medicine at The University of Manchester, led a team of researchers on the
study which is published in Annals of Rheumatic Diseases journal.
Aime said that the
study also highlighted the importance of fungaria as scientific resources
for the
genomic age.
«This
study demonstrates the value of testing lung cancer tissue
for an ALK rearrangement, and it underscores the potential of cancer
genomics to target cancer treatments to each patient,» says the
study's senior author, Pasi A. Jänne, MD, PhD, who is the director of the Lowe Center
for Thoracic Oncology of Dana - Farber.
«First, there is no single road map to eusociality — the complex, cooperative social system in which animals behave more like superorganisms than individuals fending
for themselves,» said Gene Robinson, a lead on the
study who is a professor of entomology and director of the Carl R. Woese Institute
for Genomic Biology at the University of Illinois.
«Our
study provides an example of the utility of comparative
genomics and evolutionary models
for medicine,» Sunyaev said.
In 2010 the Deciphering Developmental Disorders (DDD)
study was established to find diagnoses
for children with unknown developmental diseases using
genomics.
Dr. Jones obtained his Ph.D. in 2003 from the University of Birmingham Institute of Cancer and
Genomic Sciences (United Kingdom) under Professor Lawrence Young,
studying the use of gene therapy
for targeting Epstein - Barr Virus (EBV) proteins with replication - competent adenoviruses to treat EBV - driven malignancies.
«There was a major gap
for researchers using
genomic DNA sequences to understand the evolution of species complexes,» says Ryan Folk, lead author of a
study in a recent issue Applications in Plant Sciences.
If the findings of the
study are replicated in other animal models, such as pigs, they could have considerable implications
for public health, says Oluf Pedersen, professor of
genomic medicine at the Novo Nordisk Foundation Center
for Basic Metabolic Research at the University of Copenhagen.
For example, some human
genomic studies involving different ethnicities from different countries need scientific collaboration.
Although «
genomic rearrangements have been associated with autism
for awhile,» finding more of the novel changes is «quite exciting
for the field,» says Simon Gregory, an associate professor of medical genetics at Duke University's Center
for Human Genetics, who was not involved in the
study.
The Deciphering Developmental Disorders (DDD)
study aims to find diagnoses
for children with as yet unknown developmental diseases, and demonstrate that new
genomic technologies can provide improved diagnostic tests.
For the
study, which was published in Nature Communications, the group performed whole
genomic sequencing on 30 individual tumors classified as liver cancer displaying a biliary phenotype.
Results
for different
genomic partitions, methods, and data types are consistent with or contradict clades in our TENT ExaML, TENT MP - EST *, and exon - only trees and previous
studies of morphology (15), DNA - DNA hybridization (24), mitochondrial genes (14), and nuclear genes (17).
«Even when the genes driving cancer are known, clinicians don't have an efficient way to choose among the hundreds of possible drug therapies,» said
study leader Kai Wang, PhD, associate professor of biomedical informatics and director of clinical informatics at the Institute
for Genomic Medicine at CUMC.
The new
study describes a method
for targeting introns by utilizing publicly available
genomic data to find these rapidly evolving regions.
«The world of
genomics is beginning to open up
for people like me who don't
study model organisms,» Egan said.
Lead authors of the
study, Ivan P. Gorlov, Ph.D., Associate Professor of Community and Family Medicine and Christopher Amos, Ph.D., Professor of Community and Family Medicine and Director of the Center
for Genomic Medicine described a new method to analyze microarray data.
Many of the
genomic projects will eventually lead to interesting targets
for structural biological
studies.
Dr Siddharth Banka, Clinical Senior Lecturer at the Manchester Centre
for Genomic Medicine, who led the
study, explained: «Our team has identified that this new syndrome is caused by a small deletion on chromosome 6 that affects the function of hypothalamus, a region of the brain that plays a number of important roles in the body.»
«
For anorexia nervosa, researchers implicate genetic locus on chromosome 12: Powerful
genomic study of anorexia nervosa conducted to date to identify the common roots anorexia shares with psychiatric, metabolic traits.»
Professor Qian said, «The
study has provided
genomic resources
for understanding how the deep - sea mussel has adapted to the abiotic stresses and lack of photosynthesis - derived food in the deep - sea chemosynthetic environment.