GWAS Central; summary level genotype - to - phenotype information
from genetic association studies.
Not exact matches
The new framework enhances the ability to detect
genetic associations and interactions by taking advantage of data
from other genomic
studies of the same population.
With a grant
from the Morris Animal Foundation, Antczak, his collaborators Samantha Brooks and Ann Staiger
from the University of Florida, and the rest of the team applied a genomewide
association study to compare the
genetic makeup of horses with and without sarcoid tumors at more than 50,000 sites in the equine genome.
In conducting their
study, which includes detailed behavioral, medical and
genetic observations of 14 boys with CS
from 12 families, the team of scientists and physicians worked closely with families of the small but fast - growing Christianson Syndrome
Association, including hosting the group's inaugural conference at Brown's Alpert Medical School last summer.
The
association study matches
genetic variants with a trait by looking at large groups of people with that trait and then compares how their genomes differ
from a group without the trait.
To capture uncommon
genetic variants, the
study used an exome genotyping array to genotype 7,060 epithelial ovarian cancer (EOC) cases and 6,712 cancer - free women
from the Ovarian Cancer
Association Consortium.
Previous
genetic studies have examined the
association of aspirin, NSAIDs, or both with colorectal cancer according to a limited number of candidate genes or pathways.6 - 10 Thus, to comprehensively identify common
genetic markers that characterize individuals who may obtain differential benefit
from aspirin and NSAIDs, we conducted a discovery - based, genome - wide analysis of gene × environment interactions between regular use of aspirin, NSAIDs, or both and single - nucleotide polymorphisms (SNPs) in relation to risk of colorectal cancer.
The team selected possible leads
from the intersection of more than 20,000 p53 binding sites in the human genome, 10 million inherited
genetic variations genotyped in the 1000 Genomes Project, and 62,000
genetic variations associated with human cancers identified in genome - wide
association studies (GWAS).
Scientists for years have looked for the biological roots of the problem using tools such as genome - wide
association studies and gene - linkage analysis, which crunch
genetic and health data
from thousands of people in an effort to pinpoint disease - causing
genetic variants.
For a
study published in the journal Biological Psychiatry, Ole Andreassen and colleagues compared
genetic information
from Neanderthals and modern humans and found an
association between markers of human evolution and
genetic risk for schizophrenia.
Previous genome - wide
association studies (GWAS) by the group have identified new
genetic risk factors for the higher rates of asthma and poor response to bronchodilator medications seen in these minority populations — in many cases different
from risk factors seen in prior
studies conducted in European Americans.
«PrediXcan tells us which genes are more likely to affect a disease or trait by learning the relationship between genotype, gene expression levels
from large - scale transcriptome
studies, and disease
associations from GWAS
studies,» said
study leader Hae Kyung Im, PhD, research associate (assistant professor) of
genetic medicine at the University of Chicago.
The
study entitled «A multi-national Arab genome - wide
association study identifies new
genetic associations for Rheumatoid Arthritis», has now been published in the prestigious medical journal Arthritis & Rheumatology; and was supported by grant
from the Qatar National Research Fund, a member of Qatar Foundation.
Genetic loci associated with plasma phospholipid n - 3 fatty acids: a meta - analysis of genome - wide
association studies from the CHARGE Consortium
It's relatively straightforward to discover
genetic associations, but it's another matter to then go
from association to function,» explains the
study's co-senior author Jose Florez, co-director of Broad's Metabolism Program, associate professor at Harvard Medical School, and chief of the Diabetes Unit at MGH.
In the genome - wide
association study (GWAS) published in Nature, the authors looked at over 80,000
genetic samples
from schizophrenia patients and healthy volunteers and found 108 specific locations in the human genome associated with risk for schizophrenia.
With funding for over a decade
from the NSF and the USDA, the Rice Diversity Project supports QTL mapping, Genome Wide
Association Studies (GWAS), and gene discovery using a suite of open - source
genetic, genomic and bioinformatic resources developed in the McCouch lab.
ASHG 2008: Advancing Our Understanding of
Genetic Disease: New Findings
from Genome - Wide
Association Studies ASHG Press Release - November 12, 2008
Genome - wide
association study (GWAS) data
from a prospective cohort of warfarin - treated patients (n = 711) was also analyzed for
genetic variations across the CYP4F gene cluster.
CSGB scientists conduct
studies aimed at understanding complex
genetic diseases and developing new statistical methods and software to analyze data sets emanating
from large - scale
genetic association and linkage
studies.
We will provide a brief overview of results ranging
from common, to low - and rare - frequency variant - trait
association studies,
studies leveraging the diversity across populations, and
studies harnessing the power of
genetic and genomic approaches to gain insights into the biological underpinnings of these traits.
Methods: We did a genome - wide
association study of 297 P falciparum isolates
from Cambodia to investigate the relationship of 11 630 exonic single - nucleotide polymorphisms (SNPs) and 43 copy number variations (CNVs) with in - vitro piperaquine 50 % inhibitory concentrations (IC
50 s), and tested whether these
genetic variants are markers of treatment failure with dihydroartemisinin - piperaquine.
These non-significant results are arguably due to the
study's relatively small sample size for a genome - wide
association study that requires multiple testing (ranging
from N = 372 — 436 in the high and low trait comparison groups), making it unclear whether the same
genetic variants are involved in these sub-domains.
Genetic association studies in the field of psychiatric and psychological genetics have been suffering
from inconsistencies in replications of results.
I also
study the value of integrating research
from high - powered
genetic association meta - analyses and richly phenotyped longitudinal cohorts.
In a birth cohort
study, risk of psychosis in adulthood was raised by a factor of 4 if the mother, during pregnancy, reported that a baby was unwanted.49 Separation
from parents in early life has been found to predict an increased risk of psychosis in genetically vulnerable children, 50,51 and the
association between immigrant status and severe mental illness may be at least partially explained by the high rates of early separation in migrant populations.52 Adolescents at high
genetic risk of psychosis have also been found to be at increased risk of psychosis in later life if they report adverse relationships with their parents.53