BioGPS interfaces with the CouchDB instance via the REST - based web services for
gene annotation queries and retrieval.
Not exact matches
All of these
queried genes carried current GO
annotations.
Using the GOMiner algorithm, two independent category structures (biologic process and molecular function) based on the 1178 rat
genes represented on the microarray (of which 923 currently carry GO
annotations) were initially constructed and used as
Query gene files.
Recent notable enhancements include user - directed submission of data, such as micropublication; genomic data curation and presentation, including additional genomes and JBrowse, respectively; new
query tools, such as SimpleMine,
Gene Enrichment Analysis; new data displays, such as the Person Lineage browser and the Summary of Ontology - based
Annotations.
This
annotation was used to
query 107 whole genome sequences from 19 breeds and identified over 5500 alleles across the 550
genes of the seven AR loci: the IG heavy, kappa, and lambda loci; and the TR alpha, beta, gamma, and delta loci.