Should patents on
gene cell sequences follow the classical model of patent claims or be limited to specific uses («purpose - bound protection»)?
Not exact matches
That's attached to the progress of
sequencing technology, the ability to edit
cells, and other
gene editing approaches have been transformative in the immunotherapy world in recent years.
People of every nation, color, language, belief, and condition are now known to possess in their body
cells trait factors drawn by an inconceivably complex
sequence of intercombinations from a common «
gene pool.»
While all
cells in a specific organism share the identical DNA
sequence, only a fraction of those
genes are activated in a given
cell type.
«If we could use
gene editing to remove the
sequences in an embryo that cause sickle
cell disease or cystic fibrosis, I would say not only that we may do so, but in the case of such severe diseases, we have a moral obligation to do so.»
RNA molecules can attach to particular DNA
sequences to help control how much protein these particular
genes produce within a given time, and within a given
cell.
When researchers
sequenced the sponge's genome in 2010, they found
genes that help individual
cells cooperate as a group: how to divide, send signals to one another, and distinguish between friends and outsiders.
Bingwei Lu, a neuroscientist at Stanford University in California, has shown that a microRNA
sequence which suppresses certain
genes is linked to the death of brain
cells in fruit flies.
Even after the principles of epigenetics came to light, it was believed that methylation marks and other epigenetic changes to a parent's DNA were lost during the process of
cell division that generates eggs and sperm and that only the
gene sequence remained.
Running their computer algorithm, the biologists found that 5300
genes contained complementary
sequences to an miRNA — suggesting that the miRNA could control that
gene's expression, they report in the 14 January
Cell.
Project members also catalogued
sequences that mark areas where DNA unwinds from the round histone proteins that maintain the shape of chromosomes, allowing the
cell's transcription machinery to activate
genes in those areas.
Lu's team will extract immune
cells called T
cells from the blood of the enrolled patients, and then use CRISPR — Cas9 technology — which pairs a molecular guide able to identify specific genetic
sequences on a chromosome with an enzyme that can snip the chromosome at that spot — to knock out a
gene in the
cells.
To more accurately reflect the mechanisms driving oligodendrogliomas, the researchers used RNA
sequencing to study directly, on a single -
cell level,
gene expression in samples from six early - stage human tumors.
Sequencing the genome of one such organism, King and her colleagues found
genes that code for pieces of the same proteins used for the binding of
cells and communication between
cells in animals — functions that would be unexpected in such an organism.
Using a technique known as single -
cell RNA
sequencing, the team explored more than 65,000 individual
cells that exist under normal or inflammatory conditions, looking for
genes that were more active in one state or subpopulation versus another.
So we
sequenced a
gene involved in
cell growth and found a correlation in about 85 percent of the patients: If you had a certain mutation in the EGFR
gene, you responded to the drug; if you didn't have the mutation, you didn't.
The two proteins have different biochemical properties and recognize different DNA
sequences, so these properties create more options for
gene - editing,» said Dr. Olson, who holds the Pogue Distinguished Chair in Research on Cardiac Birth Defects, the Robert A. Welch Distinguished Chair in Science, and the Annie and Willie Nelson Professorship in Stem
Cell Research.
In germline
cells PIWI proteins silence the RNA from jumping
genes by cutting them in
sequences of ~ 30 nucleotides that will become piRNAs.
One aspect of
gene regulation involves enzymes placing chemical tags or modifications on histone proteins — which control a
cell's access to the DNA
sequences that make up a
gene.
By comparing proteomic and RNA -
sequencing data from people on different exercise programs, the researchers found evidence that exercise encourages the
cell to make more RNA copies of
genes coding for mitochondrial proteins and proteins responsible for muscle growth.
Berninger and others have previously shown that Sox2, Ascl1, and other transcription factors — proteins that bind to specific DNA
sequences to control the activity of
genes — can induce the nonneuronal «support
cells» known as glia to turn into neurons.
The team integrated three, complementary
gene sequencing approaches to look for mutations in tumor
cells from SS patients: whole - genome
sequencing in six subjects,
sequencing of all protein - coding regions (exomes) in 66 subjects, and comparing variation in the number of copies of all
genes across the genome in 80 subjects.
Moreover, because they had an idea of what
cells the
genes came from and what kinds of
gene sequences produce what kinds of proteins, they were able to draw some conclusions about what all those
genes are good for.
For most known
genes this «messenger» or mRNA is then shuttled off to a ribosome of a
cell where its translation into a protein
sequence occurs.
To deliver the healthy
gene, the team inserted it into an engineered virus called adeno - associated virus 1, or AAV1, together with a promoter — a genetic
sequence that turns the
gene on only in certain sensory
cells of the inner ear known as hair
cells.
But at the time, they thought it might take years to pinpoint the precise position of the
gene,
sequence it, and understand how it causes mutations to accumulate in tumour
cells (This Week, 15 May).
Molecules of dsRNA are known to travel between body
cells (any
cell in the body except germ
cells, which make egg or sperm
cells) and can silence
genes when their
sequence matches up with the corresponding section of a
cell's DNA.
Combining this mouse model with the reliable RNA
sequences allowed an efficient inactivation of
genes in primary
cells.
They then used next generation
sequencing — a state - of - the - art method to rapidly measure
gene expression — to
sequence and quantify the thousands of
genes that are expressed in hair
cells, in comparison with other
cells in the ear.
Epigenetic changes do not alter the information encoded in the DNA
sequence itself but determine whether and to what extent specific
genes are used by
cells.
You need to
sequence the
gene before you can express it in
cells.
The researchers analysed the genetic composition of myocardial
cells using state - of - the - art
gene sequencing technology.
«Previous techniques that have been used to investigate DNA control
sequences usually rely on sorting
cells one by one and measuring
gene activity in each of them,» says Dr Eva Yus, lead author of the paper.
The researchers used the power of
gene sequencing and clever computational methods to uncover the «source code» for human endothelial
cells and learn how that code is disturbed in human disease.
In order to locate all
gene switches, the Freiburg research team used modern
sequencing methods to examine the entire genome — DNA, epigenetic markers and RNA — during the development, maturation and disease of human cardiac muscle
cells.
Still unclear is how the methuselah
gene mutation makes flies more stress - resistant, but the amino acid
sequence of the protein it makes may be part of a signaling pathway that controls how well
cells resist or repair these stresses.
«The
cells in our bodies share the same
genes and DNA
sequences, and differ only in how these
genes are expressed,» Bose said.
Certain
sequences of DNA make up
genes, which are the «instructions» for making proteins that do most of the heavy lifting within a
cell.
With
gene - editing tools such as CRISPR, scientists can now eliminate immune - provoking sugars from the surface of pig
cells, introduce human
genes that regulate blood coagulation to prevent dangerous clots, and snip out viral
sequences that some fear could infect a human host.
In vitro experiments and high - throughput RNA
sequencing revealed that CTCF deletion profoundly altered the B lymphocyte transcriptional program, shifting
cells from a
gene expression profile typical of the germinal center to one more similar to that seen in plasma
cells.
Technologies such as RNA
sequencing are revealing which
genes are expressed in each individual
cell.
A string of methyl groups attached to a
gene can prevent a
cell from reading its DNA
sequence.
To find the missing ingredient, Alan Cooper, an evolutionary biologist at the University of Adelaide in Australia, radiocarbon dated nearly 100 fossils from Patagonia and
sequenced their mitochondrial DNA,
genes found in the power plants of
cells and passed down only from the mother.
Now that the
sequence of the PfEMP1
genes and proteins is known, it may be possible to screen for drugs to block the production of the proteins, and so prevent infected
cells sticking to capillaries.
Subsequent RNA
sequencing suggested that digoxin inhibits HIV - 1
gene expression as well as the activation and metabolism of CD4 + T
cells.
Surprisingly, they found that although the patterns of
gene expression — as shown by the RNA
sequencing — differed between the hepatocellular carcinomas and the liver cancers with biliary phenotype and depended on the histological type, the overall pattern of mutations in the
cells was actually similar between the tumors — of either type — that had emerged in patients who had had infections with either hepatitis C or B, and were different in patients without such infections.
Derived mostly from human embryonic kidney 293T (HEK293T) and HeLa
cell lines, EdiGene Knockout (KO) Cell Lysates have been optimized through the use of genome editing technology and validated at the genomic level through PCR and Sanger - sequencing techniques to ensure the accuracy and knockout of the target g
cell lines, EdiGene Knockout (KO)
Cell Lysates have been optimized through the use of genome editing technology and validated at the genomic level through PCR and Sanger - sequencing techniques to ensure the accuracy and knockout of the target g
Cell Lysates have been optimized through the use of genome editing technology and validated at the genomic level through PCR and Sanger -
sequencing techniques to ensure the accuracy and knockout of the target
gene.
To do this, they incorporated the
gene sequence of each receptor into cultured
cells and then probed the
cells to determine if they were activated by one or more of 25 different bitter - tasting chemicals.
However, Eggan and McCarroll emphasized that now that this phenomenon has been found, inexpensive
gene -
sequencing tests will allow researchers to identify and remove from the production line
cell cultures with concerning mutations that might prove dangerous after transplantation.
After the sorting, we performed whole genome amplification on individual aggregates then
sequenced the 16S rRNA marker
genes to identify
cells comprising the aggregate.