This work presents a genomic analysis of the UM270
gene functions as compared to other available pseudomonad genomes, highlighting the genetic and functional differences between each strain of this group of fluorescent and plant growth - promoting bacteria.
Less is more: loss of
gene functions as a driving force of developmental evolution Organizers: Ingo Braasch, Cristian Cañestro
When the «healthy» HD
gene functions as it should, one of its many jobs is in the development of normal embryos.
The technology was just not efficient enough to try to look at individual
gene function as the embryo develops.»
Not exact matches
The advance is based on a technique that allows scientists to narrow in on a specific
gene and cut - and - paste bits of DNA to change its
function, known
as CRISPR - Cas9.
Our genome is nearly identical to the chimpanzee genome, a little less identical to the gorilla genome, a little less identical to the orangutan genome, and so on — and this correspondence is present in ways that are not needed for
function (such
as the location of shared genetic defects, the order of
genes on chromosomes, and on and on).
It has been estimated that 5 % to 10 % of infants who die from SIDS have novel mutations in the cardiac sodium or potassium channel
genes that result in long QT syndrome
as well
as in other
genes that regulate channel
function.44 A recent report described important new molecular and functional evidence that implicates specific SCN5A (sodium channel
gene) β subunits in SIDS pathogenesis.47 The identification of polymorphisms in
genes pertinent to the embryologic origin of the autonomic nervous system in SIDS cases also lends support to the hypothesis that a genetic predisposition contributes to the etiology of SIDS.
These proteins constantly move along the strands of our DNA, turning specific
genes on and off to make sure cells
function as expected.
Epigenetic tags help tell
genes — stretches of DNA that act
as biological instruction manuals — when to switch «on» and «off,» ultimately determining cell type and
function.
When similar analysis was performed on the db mice, it was found that the disrupted db
gene was responsible for encoding a protein that
functions as a leptin receptor: When it binds circulating leptin at the cell surface, it sets in motion a biochemical cascade inside the cell.
As of the early 2000s, the study of
gene structure and
function, molecular genetics, has been amongst the most prominent sub-field of molecular biology.
In all the pathways so far investigated, the final result is a gradient of morphogen that
functions principally
as a transcription factor, initiating or suppressing the transcription of one or more target
genes in a concentration - dependent manner.
The
genes that encode the botulinum toxin protein along with accessory proteins that protect the botulinum toxin and ensure it
functions, are organised
as a
gene cluster.
Current research shows that so - called «orphan
genes» may appear
as if by magic
as a result of mutations in segments of DNA that previously had no
function.
What's more, the
gene codes for a chemical receptor involved in many brain
functions, such
as learning and memory, so the
gene might also be involved in behavioral disorders.
«The key point here is that we can say something about how the
gene acts to influence this behavior — that is, is by
functioning as a chemical messenger in cells that control this behavior in the brain.
Gene expression is the process whereby the genetic information of DNA is used to manufacture functional products, such
as proteins, which have numerous different
functions in living organisms.
These strands, known
as oligonucleotides, take only a day or two to prepare and can be used to create custom
genes to give cells new
functions.
To test the hypothesis, sperm RNA elements corresponding to specific
genes were characterized
as a
function of disease association.
As mere fragments of
genes, ESTs by themselves generally have no intrinsic
function in an organism.
Because the prion - forming protein identified in the study normally
functions as a regulator of
gene activity, the researchers say their discovery raises the possibility that when it switches to a prion state, it could alter genetic expression and bacterial behavior.
These two
gene families likely allowed the octopus to build unique neural circuits serving
functions such
as memory, navigation and planning.
It is being used
as a genome - wide tool, to search thousands of
genes in a cell and screen for their
function.
After extensive analysis of this new
gene, the team discovered that moc1
functions as a chloroplast - specific «Holliday junction resolvase», which Nishimura continues, «is very important in untangling a DNA structure called Holliday junctions.
All adult cells contain an organism's entire set of
genes, but they shut off all save those
genes they need to
function as hair, blood and so forth.
With rapid advances over the past 10 years in technologies for discovering and analyzing the
functions of
genes, researchers are now increasingly able to get at the biological roots of complex disorders such
as substance abuse and addiction.
They processed data relating to genetics, including DNA sequences, and to
gene expression,
as well
as epigenetic features — chemical reactions that influence genome
functioning and hence phenotype by activating and deactivating
genes.
Korenberg was the early pioneer of studying these individuals with partial
gene deletions
as a way of gathering clues to the specific
function of those
genes and
gene networks.
Indeed, after Siddle added a squirt of interferon - gamma — a chemical messenger that activates numerous
genes involved in producing MHC antigens — to cells cultured from devil tumors, the MHC
genes functioned normally again, and the tumor cells» identity cards showed up, plain
as day.
Since beginning a lab dedicated to understanding cancer metastasis at Rockefeller six years ago, Associate Professor Sohail Tavazoie has found that microRNAs — tiny strands of RNA that
function as switches to inactivate specific
genes — play an important role in controlling
genes linked to metastasis.
The cut DNA is then either left
as - is, silencing it, or repaired by using the
gene editor to slip in a new,
functioning segment.
The two
genes implicated — GNAQ and GNA11 — code for proteins (known
as G proteins) that normally
function as molecular on - off switches, regulating the passage of information from the outside to the inside of a cell.
First author Kim Martinod, a graduate student in the Immunology Graduate Program at the Harvard University Medical School, found that, in response to vein constriction, these «rescued» mice now could
function normally, forming clots
as efficiently
as mice with a
functioning Pad4
gene, demonstrating that the Pad4
gene did produce a
functioning PAD4 enzyme in these white blood cells to regulate blood clotting.
In its modern form, this «riverine barrier hypothesis» posits that the Amazon's major rivers
functioned as natural barriers to
gene flow between populations.
Potentially explaining why even healthy brains don't
function well with age, Salk researchers have discovered that
genes that are switched on early in brain development to sever connections between neurons
as the brain fine - tunes, are again activated in aging neuronal support cells called astrocytes.
Previous studies have looked mainly at
genes causing atherosclerosis and
genes affecting the
function of platelets and clotting processes
as risk factors for ischemic stroke (clot obstructing blood flow to the brain).
One of these, his most influential, outlines his original use of microarray expression profiles
as a phenotypic footprint for
gene function.
Some of the
genes identified have known
functions in brain development,
as well
as roles in learning and memory, the researchers said.
Scientists have identified
genes that are active during puberty, but most also have key
functions in other basic processes, such
as regulating fat.
One
gene that controls this pathway, HDAC7, is known to be a key factor in immune tolerance and the new data strongly suggests exploring the possibility that drugs affecting HDAC7
function may serve
as future therapeutics in PSC.
Large - scale methods of probing samples, such
as DNA sequencing, microarrays, and automated
gene -
function studies, are filling new databases to the brim.
In the next phase of the study, we will examine and categorize the
functions of the
genes that we identified — not only in model organisms, but also in agriculturally and economically important crops such
as corn.»
Kolodner describes the mismatch repair
genes as performing the «cellular equivalent of a spellchecking
function».
The
function of these
genes were involved in molecular maintenance strategies, such
as DNA repair, chromosomal maintenance, immune response and programmed cell death The authors argue that the «slower rate of change in these
functions is consistent with increased constraint on somatic cell maintenance
as would be required in these relatively long - lived and large - bodied mammals, illustrated by the additional large and long - lived species with slower rates in these
genes (e.g. double - strand break repair
gene XRCC4 is also highly constrained in elephant.»
The three Ras
genes found in humans — H - Ras, K - Ras and N - Ras — were among the first to be linked to cancer development, and a new study led by VCU Massey Cancer Center researcher Paul Dent, Ph.D., has shown the recently approved breast cancer drug neratinib can block the
function of Ras
as well
as several other oncogenes through an unexpected process.
«It wasn't known whether miR - 486
functioned as an oncogene or a tumor - suppressor
gene in lung cancer,» says co-corresponding author Patrick Nana - Sinkam, MD, associate professor of medicine and a researcher with the OSUCCC — James Molecular Biology and Cancer Genetics Program.
As reported April 17 in the Proceedings of the National Academy of Sciences, Buchman and her colleagues developed a
gene drive system termed Medea (named after the mythological Greek enchantress who killed her offspring) in which a synthetic «toxin» and a corresponding «antidote»
function to dramatically influence inheritance rates with nearly perfect efficiency.
Computational genomics includes: bio-sequence analysis,
gene expression data analysis, phylogenetic analysis, and more specifically pattern recognition and analysis problems such
as gene finding, motif finding,
gene function prediction, fusion of sequence and expression information, and evolutionary models.
We know that Hox
genes encode transcription factors that control the activity of other
genes, but we found that digit - innervating motor neurons also express other
genes, such
as FIGN and CNEP4], and we still don't know the
function of any of these other
genes.
Our
genes can be thought of
as packets of information written in sequences of DNA bases, which encode proteins that perform the
functions necessary for life.