Three pools of 10 blastocysts / group were analyzed; a and b indicate statistical differences for
each gene transcription at P < 0.05; error bars represent SEM.
Two animals pooled per sample, with triplicated sample; * indicate statistical differences for
each gene transcription at P < 0.05; error bars represent SEM.
10/10/2007 Researchers Reveal Repressor Protein Blocks Neural Stem Cell Development A protein known to repress
gene transcription at the molecular level in a variety of processes also blocks embryonic neural stem cells from differentiating into neurons, according to a study by University of California, San Diego and Howard Hughes Me... More...
Not exact matches
Using an innovative crystallization technique for studying three - dimensional structures of
gene transcription machinery, an international team of researchers, led by scientists
at Penn State, has revealed new insights into the long debated action of the «magic spot» — a molecule that controls
gene expression in Eschericahia coli and many other bacteria when the bacteria are stressed.
Based on previous work, the researchers had reason to think it was controlled by
transcription factors — proteins that control the expression of certain
genes by binding to DNA
at specific locations to induce (or block) the
transcription of information from DNA to RNA.
Genes become more or less active at the touch of proteins called transcription factors, each of which can influence hundreds or thousands of other g
Genes become more or less active
at the touch of proteins called
transcription factors, each of which can influence hundreds or thousands of other
genesgenes.
Here, we present evidence of widespread divergent
transcription at protein - encoding
gene promoters.
Active
genes produce promoter - localized sense and antisense short RNAs, suggesting frequent
transcription by divergently oriented RNA polymerase II complexes
at mammalian promoters.
Jones, 62, is an expert in
transcription elongation, a process that controls the expression of HIV and cancer
genes; she has been
at the Salk since 1986.
Thus, this cDNA derives from a
gene (oct - 2) that specifies an octamer binding protein expressed preferentially in B lymphocytes, proving that, for
at least one
gene, a cell - specific
transcription factor exists and its amount is controlled through messenger RNA availability.
They also show how the
transcription activator protein helps RNA polymerase bind to the DNA helix
at a specific site preceding a
gene, and how the
transcription activator protein helps RNA polymerase unwind the DNA helix to initiate
transcription of the
gene.
«The paper provides a dazzling snapshot of the process of
transcription activation — the process whereby a
gene is turned on in response to an instructive signal from the environment,» said Ann Hochschild, professor of microbiology and immunobiology
at Harvard Medical School, who also was not part of the study.
At that point, a particular type of protein called a
transcription activator can kick - start the molecular process by which a
gene gets turned on.
Only some of the plant's 30,000
genes are active in a given root cell
at a given time, thanks to proteins called
transcription factors that turn
genes on and off as needed.
The researchers led by Prof. Mihaela Zavolan and Prof. Anne Spang, both
at the Biozentrum of the University of Basel, have discovered how the
transcription factor Gcn4, a protein that regulates the expression of many
genes, extends the life of baker's yeast Saccharomyces cerevisiae.
«We found that MYSM1 creates access to proteins that enhance
gene transcription and, ultimately, the maturation of natural killer cells themselves,» said Vijayalakshmi Nandakumar, a Ph.D. student
at the Keck School of Medicine of USC and the study's first author.
«We concluded that RAC1 regulates lung branching morphogenesis, in part through the so - called canonical Wnt signaling pathway, which leads to the regulation of the
transcription of many
genes,» said principal investigator Denise Al Alam, PhD, of the Department of Surgery and the Developmental Biology and Regenerative Medicine Program
at The Saban Research Institute.
«It's possible that microRNAs go into the bloodstream and affect the potential
transcription of these
genes in the sperm,» says Brian Dias
at Emory University in Atlanta, Georgia, who led the work in mice.
In addition to looking
at transcription factors, researchers have studied the
genes that code for the enzymes responsible for building up the plant's biomass.
Solving a puzzle of plant manipulation Rather than try to isolate single
genes related to secondary cell wall production, the researchers looked
at the function of hundreds of
transcription factors working within the root xylem's regulatory network.
MYCN and its kin are «
transcription factors,» proteins that bind to DNA and influence the rate
at which genetic information is used by the cell — essentially serving as brightener / dimmer switches for
gene activity.
To find that
gene, developmental biologist Deepak Srivastava of the University of Texas Southwestern Medical Center
at Dallas and colleagues studied development of the mouse heart, in which a
transcription factor called dHAND was known to turn on an array of crucial
genes.
«I think this is going to be a fairly complex thing to work out,» Reeves says, adding that Ets2 encodes a
transcription factor that influences the activity of
at least 200 other
genes.
Researchers
at Princeton observed that
transcription occurs in bursts in response to a single enhancer acting simultaneously
at two
genes, one labeled with green dye in the left panel and the other labeled with red dye in the middle panel.
Transcription factors determine which
genes are active
at what time and in which conditions and consequently have a critical role in organisms.
Furthermore, GNC and GNL act,
at the
gene expression level, in an additive manner with the GOLDEN2 - LIKE1 (GLK1) and GLK2
transcription factor
genes, which are also important for proper chlorophyll accumulation.
The researchers used this live - imaging technique to study fly embryos
at a key stage in their development, approximately two hours after the onset of embryonic life where the
genes undergo fast and furious
transcription for about one hour.
In research published this week in the Journal of Neuroscience, University
at Buffalo scientists and colleagues focused on a particular protein, called a
transcription factor, that regulates
gene activity necessary for the development of one type of retinal neuron, the horizontal cells.
In 1984, he moved to the Institute for Molecular and Cellular Biology,
at Osaka University (Osaka, Japan), where his research group continued to study the regulation of interferon
genes and discovered the interferon - regulatory - factor family of
transcription factors.
Scientists have long known that RNAPII appears to stall or «pause»
at specific
genes early in
transcription.
Of 17 regulatory variants identified in the two
genes with regulatory variant burden, we show that
at least six alter
transcription factor - DNA binding in human neuroblastoma cells.
Upregulated
genes clustered into
at least 7 functional groups, including immediate early
genes or
transcription factors, cell - cycle related
genes, stress - responsive protein
genes, cell signaling protein
genes, cell adhesion and cell surface protein
genes,
genes involved in translation and protein turnover, and
genes encoding metabolic proteins.
Study coauthors Rammohan Rao of the Buck Institute for Research on Aging and Dale Bredesen of the Buck Institute and UCLA «have provided evidence for a novel — in fact, radical — idea: that ApoE somehow gains access to the nucleosol and acts as a conventional
transcription factor, influencing the expression of a large number of
genes,» Steven Barger, who studies neurodegenerative disease
at the University of Arkansas for Medical Sciences and was not involved in the study, wrote in an email to The Scientist.
Transcription factors are expressed (or made)
at different levels in different cell types, and control what
genes are expressed in every cell, making sure, for example, that a liver cell remains a liver cell and does not become a neuron.
R - loop accumulation
at a
gene can prevent
transcription, and these loops are also often sites of DNA breaks.
Multiple transcripts arising from alternative initiation or polyadenylation sites, or alternative RNA splicing
at a single locus were not considered as multiple
genes but as variants of a single
transcription unit.
Working with Nancy Cox, PhD, professor of medicine and human genetics and section chief of genetic medicine
at the University of Chicago, Bell discovered mutations in the
genes for glucokinase and for three
transcription factors that cause an early - onset form of diabetes called maturity - onset diabetes of the young.
As a researcher of the molecular mechanisms of
gene transcription, Sampley Bohn conducted her postdoctoral research
at the National Institutes of Health in the National Institute of Child Health and Human Development.
PULLMAN — Researchers
at Washington State University have identified a new class of DNA sequence variation in
gene promoter regions that could help control the activity of
genes.The novel variations, dubbed «multiple nucleotide length polymorphisms,» or MNLPs, altered
transcription of the
genes they were associated with as much as 11-fold.
«Looking
at gene expression, the ketogenic diet suppressed the longevity - related TOR pathway and insulin signaling and up - regulated the fasting - related
transcription factor PPAR - alpha, a master regulator that helps the body more efficiently metabolize fat.»
Our colleagues
at Gladstone are using this knowledge to search for small molecules that can affect
gene regulation and reverse some of the problems caused by the loss of these
transcription factors.»
Protein generation, one molecule
at a time in E. coli cells, has been observed and studied including how a
transcription factor binds to DNA and regulates
gene expression.
SAN FRANCISCO, CA — Scientists
at the Gladstone Institutes have discovered that three
transcription factors — proteins that direct
gene expression — interact with each other and the genome to influence how a heart forms in an embryo.
Any reads that map to multiple locations in the genome (also called multireads) are not counted towards the expression estimates since they can not be assigned to any
gene unambiguously, but these provide evidence of
transcription in
at least one of the loci to which they map.
«The University of Missouri will look
at how
genes,
transcription and metabolism are affected within the same cells.»
Venus positive cells experiencing low - level
transcription at the Hex locus, but still expressing the ES cell markers SSEA - 1 and Oct4, show elevated levels of PrEn
gene expression and reduced levels of early ICM markers such as Nanog.
What's more, one
transcription factor typically targets thousands of genomic locations in the cell and changes
gene expression
at each location.
de Dios Hourcade J, Lopez - Vidriero I, Benguria A, De Fonseca FR, Gutierrez - Adan A. Analysis of
gene transcription alterations
at the blastocyst stage related to the long - term consequences of in vitro culture in mice
DNA regions bound
at low occupancy by
transcription factors do not drive patterned reporter
gene expression in Drosophila.
Random fluctuations in
transcription are unavoidable and a general aspect of life
at the single - cell level and lead to «noise» around the average level of
gene expression.