Sentences with phrase «generation sequencing pipeline»
We refer interested readers to systematic comparisons of other aspects of the next - generation sequencing pipeline, for example comparisons of benchtop high - throughput sequencing technologies [56], short - read mappers [57], variant callers [58] and variant - calling pipelines as a whole [59, 60].
https://genomemedicine.biomedcentral.com/ Not exact matches
They developed a pipeline that combined fosmid - pooling strategy with whole - genome shotgun strategies, based solely on next generation sequencing (NGS) and hierarchical assembly methods.
Ebba is a Master student from the «X-program» (Engineer program in Molecular Biotechnology) from Uppsala University, and she will work on building efficient bioinformatics pipelines for efficient analyses of large amounts of next - generation sequencing data.
The paper describes various challenges arising from the process of designing a benchmark strategy for bioinformatics pipelines (2) in the identification of antimicrobial resistance genes in next generation sequencing data.