Sentences with phrase «genome analysis tool»

Scientists use the genome analysis tool to break DNA down into smaller pieces, then sequence those and assemble those into longer pieces.

Using genome analysis tools, scientists outlined the multistage process that sperm stem cells undergo during their normal development.

Broad Institute is working with collaborators to develop cloud - hosted options to expand access and facilitate usage of genome analysis tools for even more powerful insights and decision - making.

«By providing a cloud - hosted solution, we can greatly expand access and facilitate usage of these genome analysis tools,» said Eric Banks, senior director of Data Sciences and Data Engineering at Broad and a creator of the GATK software package.

Not exact matches

Professor Ed Feil, joint lead author from the Milner Centre for Evolution, at the University of Bath, said: «We've developed user - friendly analysis software that demonstrates how whole genome sequence data can be a powerful tool for pan-European surveillance of MRSA and other important pathogens.

«New tools yield superior genome analysis results.»

The second tool, SuperExactTest, establishes the very first theoretical framework for assessing the statistical significance of multi-set intersections and enables users to compare very large sets of data, such as gene sets produced from genome - wide association studies (GWAS) and differential expression analysis.

The TrueMethyl Whole Genome (TMWG) integrated workflow system for processing DNA samples includes all - in - one reagents for sample conversion, library creation, and indexing, combined with bioinformatics tools to enable accurate DNA modification analysis through next - generation sequencing methods.

Scientists for years have looked for the biological roots of the problem using tools such as genome - wide association studies and gene - linkage analysis, which crunch genetic and health data from thousands of people in an effort to pinpoint disease - causing genetic variants.

In a study published online today in Genome Research, scientists developed a new tool to examine genetic differences within bacterial species and uncover novel transmission patterns in mother - infant microbiomes and marine metagenomes not previously appreciated by species - level analyses.

Utilize turn - key analysis pipelines and visualization tools for investigating variation within whole genome, exome and single cell samples.

Using deCODE's proprietary analysis tool for complex traits, the deCODE Clinical Genome Miner ™, the researchers were able to correlate a wide range of clinical, behavioral, and genotypic data, and gained important new insights into the heritability of different aspects of obesity, as well as into the complex interplay between obesity and diabetes, stroke, heart disease, and hyperlipidemia.

As a part of VIOLIN, we have developed Vaxign, the first web - based publically available vaccine target design tool based on bioinformatics analysis of genome sequences using the strategy of reverse vaccinology.

According to Dr Adil Mardinoglu, SciLifeLab Fellow and leader of the systems biology effort in the project: «We are now in possession of incredibly powerful systems biology tools for medical research, allowing, for the first time, genome - wide analysis of individual patients with regards to the consequence of their expression profiles for clinical survival.»

A key program of VIOLIN is Vaxign, the first web - based publically available vaccine target design tool based on bioinformatics analysis of genome sequences using the strategy of reverse vaccinology.

As summarized in this article, the scientists of the BDGP believes that the benefits of the whole genome analysis can best be realized if it is coupled with powerful genetic tools.

Not all of the analyses provided in the Cancer Genome Sequencing Service are reproduced by CGA Tools.

This paper presents the characterization of the oil palm genome using different gene prediction methods and comparative genomics analysis, identification of FA biosynthesis and disease resistance genes, and the development of an annotation database and bioinformatics tools.

CGA ™ Tools supports some of the paired analyses provided in the Cancer Genome Sequencing Service.

VAAST (the Variant Annotation, Analysis & Search Tool) is a probabilistic search tool for identifying damaged genes and their disease - causing variants in personal genome sequences.

The 2006 Nobel Prize in Physiology or Medicine recognized the discovery RNA interference (RNAi), a basic mechanism of gene regulation that also provides an important new tool for functional genome analysis.

Our goal is to provide intuitive bioinformatics tools for the visualization, interpretation and analysis of pathway knowledge to support basic research, genome analysis, modeling, systems biology and education.

PLINK: a tool set for whole - genome association and population - based linkage analyses.

His group developed sample and data tracking systems, automated sequence - assembly tools for the Human Genome Project and sequence variation analysis methods for the SNP Consortium Project and the International Haplotype Map Project.

Proteome analysis relies on modern mass spectrometers, as well as the availability of sequenced genomes and bioinformatics tools.

These include variant analysis and annotation tools as well as therapeutic prediction tools and gene - drug interaction resources, many of which are integrated in the Genome - Phenome Analysis Panalysis and annotation tools as well as therapeutic prediction tools and gene - drug interaction resources, many of which are integrated in the Genome - Phenome Analysis PAnalysis Platform.

Recent advances in high - throughput molecular and cellular profiling tools, particularly genome - wide transcriptomic analysis, offer the potential for unprecedented insights into the mechanisms underlying the acquisition of immunity.

New tool (mtPHYL) proposed for phylogenetic analysis of human complete mitochondrial genomes.

These genetic tools / approaches allow biological validation of loci discovered by analysis of cancer genomes.

Because no genetic material is gained or lost, conventional tools for genome analysis can not generally detect BCAs.

Recent notable enhancements include user - directed submission of data, such as micropublication; genomic data curation and presentation, including additional genomes and JBrowse, respectively; new query tools, such as SimpleMine, Gene Enrichment Analysis; new data displays, such as the Person Lineage browser and the Summary of Ontology - based Annotations.

Researchers have also focused on the development and application of sophisticated tools for genome analysis that permit high resolution mapping of deletions, amplifications and changes in the sequence or epigenetic status of chromosomal loci.

With the subcellular location restricting a protein's possible function, this method should be a useful tool for the systematic analysis of genome data and is available via a server on the world wide web.

All of this work is based on our successful published efforts to both build tools and analyze sequence analysis from the canine genome.

Stanford University About Blog The Saccharomyces Genome Database (SGD) provides comprehensive integrated biological information for the budding yeast Saccharomyces cerevisiae along with search and analysis tools to explore these data, enabling the discovery of functional relationships between sequence and gene products in fungi and higher organisms.