Sentences with phrase «identified phylogenetic»

Notably, the closest identified phylogenetic relative to TMAdV among the complete genomic sequences available in GenBank is a rhesus monkey adenovirus, SAdV - 3 (Fig. 4; Table 2).

The lack of any species - specific patterns suggests that accessory cusps in hominoids are developmentally homoplastic and that they may not be useful for identifying phylogenetic homology.

We present the genomes of six whales, including the blue whale (Balaenoptera musculus), to reconstruct a species tree of baleen whales and to identify phylogenetic conflicts.

Not exact matches

Furthermore, despite the claim that evolution has no application, phylogenetic comparisons of humans and other organisms allows us to identify the precise location and putative function of genes responsible for developmental disorders.

What opened the door for me was phylogenetics, the field of biology that deals with identifying and understanding the relationships among the many different kinds of life.

«Genome - wide data help identify an avian species - level lineage that is morphologically and vocally cryptic,» appears in the journal, Molecular Phylogenetics and Evolution.

Stankowich et al. used natural history data, including range overlap with potential predators, body size, and activity patterns, in conjunction with comparative phylogenetic analyses on 181 species of mammals to identify patterns of predation risk that could have contributed to the evolution of these two defensive strategies.

We identify ancient phylogenetic structure within African haplogroups and resolve a long - standing ambiguity deep within the tree.

DNA sequencing of the fungi in the samples identified fragments of DNA, called phylogenetic markers, which can be counted and used to distinguish one type of fungus from another.

Novel method to identify source - associated phylogenetic clustering shows that Listeria monocytogenes includes niche - adapted clonal groups with distinct ecological preferences.

By identifying haplotypes from single - molecule reads, the authors were able to construct phylogenetic trees of the leukemic cells in a single patient, something that could only be done on the 454 platform.

For this general overview, large collections of SAGs will be analysed at the 18S rDNA level to obtain a biodiversity inventory, and to identify a set of related uncultured lineages potentially occupying a similar ecological niche (i.e. bacterivory) as ascertained by their phylogenetic placement.

Although many different phylogenetic subclusters were present before and after vaccine introduction, some unique clusters were only identified after vaccine introduction, which could be due to natural fluctuation or the first signs of vaccine - driven evolution.

seek to identify the mutational processes underlying mutational signatures found in cancers, characterise the mutational processes operating in normal cells, use phylogenetic analyses of somatic mutations in humans to explore cellular lineages during embryonic development

«Previously, phylogenetic trees were constructed from standard sets of genes and were used to identify the relationships of species,» said Gloria Coruzzi, a professor in New York University's Center for Genomics and Systems Biology and the principal investigator of the NSF grant.

Phylogenetic analyses place XMRV firmly within the murine endogenous retroviruses [3] even though no identical element has so far been identified within the mouse genome [4].

In this project, I applied NASP for single nucleotide polymorphism (SNP) identification and characterization, and used FigTree and PHYLOBar for phylogenetic analysis and visualization.The NASP method differs from other published SNP pipelines in terms of supported short - read aligners and SNP callers, the ability to call both monomorphic and polymorphic sites, and the ability to integrate the results from multiple SNP callers and identify the consensus set of SNPs that define the population structure.

Using whole - genome phylogenetic analysis, we placed these in the context of previously sequenced K. pneumoniae populations from geographically diverse countries and identified their virulence and drug resistance determinants.

The scale and scope of these data are enabling genotype - phenotype association studies to identify genetic determinants of pathogen virulence and drug / insecticide resistance, and phylogenetic studies to track the origin and spread of disease outbreaks.

Within the major clade, seven further phylogenetic groups can be identified, demonstrating geographical associations.

MetG phylogenetic tree was evaluated against the 16srRNAS tree and HGT event identified.