Annotations in CharProtDB include gene name, symbol and various controlled vocabulary terms,
including Gene Ontology terms, Enzyme Commission number and TransportDB accession.
In addition, the Alliance
includes the Gene Ontology (GO) Consortium.
Not exact matches
Dr.. He has initiated and led the development of several community - based
ontologies,
including Vaccine
Ontology (VO),
Ontology of Adverse Events (OAE),
Ontology of
Genes and Genomes (OGG), and Interaction Network
Ontology (INO).
In addition to official symbols and aliases, BioGPS supports most common public
gene identifiers, including Entrez Gene, Ensembl, Uniprot, Refseq, UniGene, Gene Ontology, PDB, and Inter
gene identifiers,
including Entrez
Gene, Ensembl, Uniprot, Refseq, UniGene, Gene Ontology, PDB, and Inter
Gene, Ensembl, Uniprot, Refseq, UniGene,
Gene Ontology, PDB, and Inter
Gene Ontology, PDB, and Interpro.
Recent notable enhancements
include user - directed submission of data, such as micropublication; genomic data curation and presentation,
including additional genomes and JBrowse, respectively; new query tools, such as SimpleMine,
Gene Enrichment Analysis; new data displays, such as the Person Lineage browser and the Summary of
Ontology - based Annotations.
Many of the model organism databases (MODs) used by members of the GSA community —
including FlyBase, WormBase, SGD, ZFIN, and MGI — have been supported by NIH's National Human Genome Research Institute (NHGRI), along with others supporting human and other research — such as OMIM, the
Gene Ontology Consortium, and UniProt.
For a typical RNA - Seq project: mapping to the transcriptome
including QA, expression quantification, differential expression analysis,
gene ontology and (un --RRB- supervised classification.