Four of these six regions are located in
known gene clusters: the protocadherin alpha cluster, two olfactory receptor clusters and a recently identified human microRNA cluster (Figure 2).
Not exact matches
Researchers have
known for decades that the glycophorin
cluster of
genes is highly variable, but it was not possible to show that this genetic variation was responsible for protecting people against severe malaria.
Genome sequencing revealed that the isolated B. pumilus contained three unique
gene clusters for the production of antimicrobial peptide compounds
known as bacteriocins.
These microbes essentially keep mug shots of dangerous viruses in their DNA, storing snippets of viral
genes between certain repeated segments of their own
genes in a natural biological process
known as CRISPR, for
clustered regularly interspaced short palindromic repeats.
Most analytical approaches to this problem are rather rudimentary and involve calculating simple correlations among the
genes whose expression changes in response to a perturbation,
clustering the
genes by molecular or
known functional class, and drawing crude inferences about mechanism on that basis.
Plant biologists have long
known that
clusters of
genes can do related tasks.
In their new study, the researchers looked for
gene clusters associated with calcium - binding motifs similar to those in
known antibiotics such as daptomycin and friulimicin, which require calcium for their antimicrobial action.
This past year, scientists hijacked survival tactics of prokaryotes to deliver the technological biological blockbuster
known as the CRISPR (
clustered regularly interspaced palindromic repeats) Cas (CRISPR associated
genes) system.
Clustered regularly interspaced short palindromic repeats, also
known as CRISPR, evokes a sense of unease in many people, especially since the term has become synonymous to
gene editing technology.
The human T cell receptor beta (TRB, previously
known as TCRB)
gene locus on chromosome 7 (7q34) includes 65 Vb (variable)
gene segments, followed by two separate
clusters of
genes each containing a Db (diversity)
gene, several Jb (joining)
genes, and a Cb (constant) region spread over 685 kilobases.
Our analysis predicts that the latter participate in the same biological processes as the
known genes in the corresponding
clusters — thus providing a starting point to study the function of poorly characterized transcripts.
In addition to well - described
genes,
clusters often contain transcripts the function of which has not yet been associated with a specific biological process thus providing novel unexplored links to
known molecular pathways.
A large number of both
known and novel biosynthetic
gene clusters were identified, indicating that P. mesoacidophila ATCC 31433 is an untapped resource for discovery of novel bioactive compounds.
Genes with high expression levels are
clustered in genomic regions
known as ridges.