Sentences with phrase «macromolecular modeling»

Vertrees was first introduced to PyMOL in 2005 as a graduate student in biophysics at the University of Texas Medical Branch at Galveston during a class on macromolecular modeling.

The work is based in the Rosetta macromolecular modeling package developed by Baker and his colleagues.

Not exact matches

Molecular dynamics was used to refine macromolecular structures by incorporating the difference between the observed crystallographic structure factor amplitude and that calculated from an assumed atomic model into the total energy of the system.

an image processing framework to obtain 3D models of macromolecular complexes using 3D EM that allows you to execute workflows combining different software tools, while taking care of formats and conversions.

Optical imaging and spectroscopy, advanced optical imaging techniques in particular super-resolution fluorescence microscopy, optical physics, nanotechnology, single - molecule biophysics and macromolecular biochemistry, single - molecule imaging, gene expression, computational modeling, single - molecule (force) spectroscopy, biomolecular engineering, nucleic acid nanotechnology

The presented work applies GPUs to rapidly refine initial placements of protein models into low resolution density maps thereby accelerating construction of atomic - detail models for large macromolecular assemblies.