Sentences with phrase «microarray analysis of»

(2005) Whole Retinal Microarray Analysis of DBA / 2J Mice: A Model for Glaucoma (Investigative Ophthalmology & Visual Science, 46: ARVO E-Abstract 48).

Antibody Cross-Reactivity Testing Using the HuProt ™ Human Proteome Microarray Analysis of several commercially available antibodies against nearly 75 % of the human proteome.

Microarray Analysis of Retinal Gene Expression in the DBA / 2J Model of Glaucoma Steele, MR., Inman DM., Calkins, D.J., Horner, P.J. & Vetter, M.L. (2006) Investigative Ophthalmology & Visual Science, 47:977 - 985.

41) Chari R, Lockwood WW, Coe BP, Chu A, Macey D, Thomson A, Davies JJ, MacAulay C, Lam WL (2006) SIGMA: a system for integrative genomic microarray analysis of cancer genomes.

Microarray analysis of prostate cancer progression to reduced androgen dependence: studies in unique models contrasts early and late molecular events.

We also performed microarray analysis of PyMT - Slc6a14 + / + and PyMT - Slc6a14 − / − mammary tumours to evaluate the expression of amino acid transporters without any biased preconception of the identity of the transporters that might be subject to changes in expression in association with Slc6a14 deletion.

To help identify genes and signaling pathways that may be influenced by zinc, Knoell and his team performed a genome - wide microarray analysis of lung tissue taken from zinc - deficient mice with sepsis.

Microbial pathogens induce specific host responses or «RNA biosignatures» that can be identified using microarray analyses of blood leukocytes (white cells).

Not exact matches

However, microarray analysis is only capable of measuring the status of known transcripts, and expression of low - abundance mRNAs is often not detected by the hybridization - based approach.

Eager to sort through the pile of curriculum vitae's on his desk, Rudnicki is particularly looking for molecular geneticists working on different stem cell systems; scientists with genomics bents like proteomics, microarray analysis, and bioinformatics; and a couple of clinician scientists.

The foil - based measuring chip uses the microarray analysis platform MCR of the Munich company GWK GmbH.

Headquartered in San Diego, California, Illumina develops microarray technologies used in large - scale analysis of genetic variation and function.

Apart from science and engineering, bioinformatics is a vital tool in microarray analysis due to the vast amounts of data that are generated from a microarray experiment.

Jason: I was analyzing some microarray data, and I reached the limit of what I knew how to do, in terms of data analysis.

The study results challenge the current paradigm of microarray data analysis and suggest that the new method may improve identification of cancer - associated genes.

A deep global analysis of the gut microbiota composition was done by phylogenetic microarray analysis using a Human Intestinal Tract Chip (HITChip), an analytical device designed specifically for studying gut bacteria.

They have now used the tools of Social Network Analysis (SNA) to help them unravel the connections and identify the biomarkers present in patient genomic microarray data.

Stephen W. Scherer, Ph.D., of the Hospital for Sick Children, Toronto, and colleagues performed chromosomal microarray analysis (CMA) and whole - exome sequencing (WES) in a group of 258 unrelated children with ASD to determine the molecular diagnostic yield (the percentage of subjects with a genetic alteration [mutation] that may contribute to the features of autism spectrum disorder) of these tests.

«We tried to do a thorough study,» Scherer says, «so that we could convince people to do a microarray analysis as part of their workup.»

A: Sheltzer: I was analyzing some microarray data, and I reached the limit of what I knew how to do in terms of data analysis.

Only Z - score analysis, a method for assessing the statistical significance of individual Virochip probes, yielded a credible viral signature on the microarray.

GOMiner — To provide additional statistical stringency to the identification of potential targets, we then analyzed the data sets generated by the SAM - RS analysis of the microarray data for hypoxia - associated coregulation of multiple, functionally related genes.

A focused oligonucleotide microarray of 1,178 genes, qRT — PCR of selected transcripts, and western analysis of hypoxia inducible factor - 1α (HIF - 1α) were used to compare retinas from the hypoxic and recovery groups to control animals that were not made hypoxic.

(A) Location of the eye field (EF), PNP, and LE tissue isolated from stage 15 Xenopus embryos for microarray analysis.

The analysis of doxorubicin resistance in human breast cancer cells using antibody microarrays.

Contact Mark Bedford ([email protected]) for experiments involving the use of protein domain microarrays, and contact Shawn Bratton ([email protected]) for experiments involving the biophysical analysis of protein complexes.

Gene Set Enrichment Analysis (GSEA) is a microarray data - mining technique used to determine whether there is coordinated differential expression or «enrichment» in a set of functionally related genes when comparing control and experimental samples [35].

Antibody microarray analysis holds promise for increasing accuracy of breast cancer screening

Therefore, we used microarray analysis to perform pairwise comparisons of the transcriptional profile of EFTF - expressing pluripotent cells to three regions of the Xenopus embryo: the eye field (EF) including underlying mesendoderm, posterior neural plate (PNP) and the non-neural, flank, lateral endoderm (LE, Figure 1A).

The department has expertise and infrastructure to support bacterial and viral analysis, and the detailed evaluation of cellular and serological immune responses including flow cytometry and cell sorting, Luminex multiplex platforms, real time PCR, microarrays, comprehensive histological staining, immunohistochemistry and in - situ hybridisation.

Yet, pericytes themselves have been shown to be a primary source of Ang1 (refs 21, 22, 23)(which was confirmed in the microarray analysis (Fig. 1a)-RRB-, suggesting an autocrine mode of action.

The names of samples within the microarray analysis were labeled C11 and T11 as for control (reference) and treatment at daytime (11:00), respectively.

As mRNA isolation is simple and since DNA microarrays are a proven genomics reagent for monitoring differential gene expression, a genome - wide expression analysis may be the fastest and most efficient method for identifying additional candidate effectors of colony queen number.

Clinical Diagnostics The platform will provide service and support in order to promote and adapt the use of high throughput techniques, such as next - generation sequencing, microarray - based analyses and multiplex protein analysis, in routine diagnostics.

Results: Benefiting from the recently sequenced genome of the model sulfate - reducing bacterium (SRB), Desulfovibrio vulgaris, microbiologist Weiwen Zhang and a team of scientists at Pacific Northwest National Laboratory (PNNL) are applying a suite of post-genomics technologies, including microarray, proteomic, and computational analyses, to obtain a broader understanding of D. vulgaris» metabolism.

In addition, analysis of the microarray results obtained with RNA from the optimized protocol showed that, as expected, the genes involved in methane production (methanogenesis) were among the most highly expressed genes in M. barkeri.

Microarray Analysis: Anti-Human SMAD4 (clone R516.2.1 D12) specificity was evaluated using CDI HuProt ™ Human Proteome Microarray and subsequently analyzed with GenePix Pro Image Acquisition and Analysis Software, the benchmark tool for the acquisition and analysis of microarrMicroarray Analysis: Anti-Human SMAD4 (clone R516.2.1 D12) specificity was evaluated using CDI HuProt ™ Human Proteome Microarray and subsequently analyzed with GenePix Pro Image Acquisition and Analysis Software, the benchmark tool for the acquisition and analysis of microarrayAnalysis: Anti-Human SMAD4 (clone R516.2.1 D12) specificity was evaluated using CDI HuProt ™ Human Proteome Microarray and subsequently analyzed with GenePix Pro Image Acquisition and Analysis Software, the benchmark tool for the acquisition and analysis of microarrMicroarray and subsequently analyzed with GenePix Pro Image Acquisition and Analysis Software, the benchmark tool for the acquisition and analysis of microarrayAnalysis Software, the benchmark tool for the acquisition and analysis of microarrayanalysis of microarraymicroarray images.

Microarray analysis revealed temperature - dependent expression of distinct sets of genes, as well as 700 A. fumigatus genes not present or significantly diverged in the closely related sexual species Neosartorya fischeri, many of which may have roles in the pathogenicity phenotype.

Microarray Analysis: Test antibody specificity was evaulated using CDI HuProt ™ Human Proteome Microarray and subsequently analyzed with GenePix Pro Image Acquisition and Analysis Software, the benchmark tool for the acquisition and analysis of microarrMicroarray Analysis: Test antibody specificity was evaulated using CDI HuProt ™ Human Proteome Microarray and subsequently analyzed with GenePix Pro Image Acquisition and Analysis Software, the benchmark tool for the acquisition and analysis of microarrayAnalysis: Test antibody specificity was evaulated using CDI HuProt ™ Human Proteome Microarray and subsequently analyzed with GenePix Pro Image Acquisition and Analysis Software, the benchmark tool for the acquisition and analysis of microarrMicroarray and subsequently analyzed with GenePix Pro Image Acquisition and Analysis Software, the benchmark tool for the acquisition and analysis of microarrayAnalysis Software, the benchmark tool for the acquisition and analysis of microarrayanalysis of microarraymicroarray images.

He'd like a way to perform single - cell analysis using microarrays, instead of full sequencing, but chip - based bisulfite methods require more nucleic acid — about a microgram — than one cell can provide.

At Berkeley, she developed computationally intensive statistical methods for the analysis of microarray data with applications in cancer biology.

Microarray Analysis: Test antibody specificity was evaulated using CDI HuProt ™ Human Proteome Microarray (~ 75 % of the human proteome) and subseqently analyzed with GenePix Pro Image Acquisition and Analysis Software, the benchmark tool for the acquisition and analysis of microarrMicroarray Analysis: Test antibody specificity was evaulated using CDI HuProt ™ Human Proteome Microarray (~ 75 % of the human proteome) and subseqently analyzed with GenePix Pro Image Acquisition and Analysis Software, the benchmark tool for the acquisition and analysis of microarrayAnalysis: Test antibody specificity was evaulated using CDI HuProt ™ Human Proteome Microarray (~ 75 % of the human proteome) and subseqently analyzed with GenePix Pro Image Acquisition and Analysis Software, the benchmark tool for the acquisition and analysis of microarrMicroarray (~ 75 % of the human proteome) and subseqently analyzed with GenePix Pro Image Acquisition and Analysis Software, the benchmark tool for the acquisition and analysis of microarrayAnalysis Software, the benchmark tool for the acquisition and analysis of microarrayanalysis of microarraymicroarray images.

Significance analysis of microarrays (SAM) analysis led to the identification of 68 differentially methylated regions (DMRs) representing a bCSCs DMR signature.

Under the stewardship of Christine Armour, the working group, consisting of members from the CCMG Clinical Practice and Laboratory Practice committees with representatives from the SOGC, have updated the 2001 Canadian guidelines for use of chromosomal microarray analysis (CMA).

Application of microarray analysis to the investigation of host - pathogen interactions.

Microarray Analysis: Test antibody specificity was evaulated using CDI HuProt ™ Human Proteome Microarray (19,394 human proteins) and subseqently analyzed with GenePix Pro Image Acquisition and Analysis Software, the benchmark tool for the acquisition and analysis of microarrMicroarray Analysis: Test antibody specificity was evaulated using CDI HuProt ™ Human Proteome Microarray (19,394 human proteins) and subseqently analyzed with GenePix Pro Image Acquisition and Analysis Software, the benchmark tool for the acquisition and analysis of microarrayAnalysis: Test antibody specificity was evaulated using CDI HuProt ™ Human Proteome Microarray (19,394 human proteins) and subseqently analyzed with GenePix Pro Image Acquisition and Analysis Software, the benchmark tool for the acquisition and analysis of microarrMicroarray (19,394 human proteins) and subseqently analyzed with GenePix Pro Image Acquisition and Analysis Software, the benchmark tool for the acquisition and analysis of microarrayAnalysis Software, the benchmark tool for the acquisition and analysis of microarrayanalysis of microarraymicroarray images.

Demonstration of loss of heterozygosity by single - nucleotide polymorphism microarray analysis and alterations in strain morphology in Candida albicans strains during infection.

Research on vaccine biomarkers, including in - depth comparative analysis of data from different platforms, large - scale RNA sequencing, harmonisation of standard operating procedures (SOPs) for sample, microarray and data analysis, as well as transcriptome mapping (more than 1400 samples analysed).

Finally, the researchers used microarray analysis to investigate the gene expression and molecular pathways in the muscles of DS mice.

Microarray Analysis Confirms the Specificity of a Chlamydomonas reinhardtii Chloroplast RNA Stability Mutant