With single - cell RNA sequencing, much
more gene transcription was detected than before.
Not exact matches
In all the pathways so far investigated, the final result is a gradient of morphogen that functions principally as a
transcription factor, initiating or suppressing the
transcription of one or
more target
genes in a concentration - dependent manner.
Other proteins, called
transcription factors, interact with the
genes more directly: They bind to landing sites situated near the
gene under their control.
Genes become more or less active at the touch of proteins called transcription factors, each of which can influence hundreds or thousands of other g
Genes become
more or less active at the touch of proteins called
transcription factors, each of which can influence hundreds or thousands of other
genesgenes.
We had started working on this
more than a year ago, when we tried inserting four
transcription factors, which regulate
genes, into the skin cells.
These are the same T cell
genes inhibited by digoxin, and since replication of integrated HIV - 1 requires
transcription of nearby
genes, this provides an explanation for why wild type HIV - 1 is
more susceptible to digoxin: digoxin represses the
genes that the virus
more frequently targets for integration.
Although the majority of
genes related to energy production, cell division, and metabolism in M. jannaschii are most similar to those found in Bacteria, most of the
genes involved in
transcription, translation, and replication in M. jannaschii are
more similar to those found in Eukaryotes.
The proximity and anchoring of the
genes to the nuclear pores during
transcription has been known of for
more than a decade.
Naturally, every
gene is not regulated by its own distinct
transcription factor; otherwise, a codebook of as many as 30,000
genes would require 30,000
transcription factors — and 30,000
more genes to code for them.
They later showed that RORA, a nuclear hormone receptor that functions as a
transcription factor, can potentially regulate the
transcription of
more than 2,500
genes, including over 400
genes already associated with autism.
Whereas liver and blood
gene activity patterns showed the expected differences among the three groupswith human
transcription looking similar to that of the chimp, and different from that of the
more evolutionarily distant macaquegene activity in the brain revealed stark differences between humans and chimps.
In response to signals from inside and outside cells,
transcription factors attach to the DNA and cause specific
genes to be
more or less activated, producing
more or less of the corresponding protein.
Genes within the same TAD interact with each other more than with genes in other TADs, and domains undergoing active transcription occupy different locations in a nucleus than quiet dom
Genes within the same TAD interact with each other
more than with
genes in other TADs, and domains undergoing active transcription occupy different locations in a nucleus than quiet dom
genes in other TADs, and domains undergoing active
transcription occupy different locations in a nucleus than quiet domains.
Studies could include examining the activation and deactivation of
genes (e.g.,
transcription factors or epigenetic regulation) or involve
more classical genetic identification studies.
«Looking at
gene expression, the ketogenic diet suppressed the longevity - related TOR pathway and insulin signaling and up - regulated the fasting - related
transcription factor PPAR - alpha, a master regulator that helps the body
more efficiently metabolize fat.»
A third,
more basic, project in our lab concerns the
transcription and splicing of very large mammalian
genes.
10/10/2007 Researchers Reveal Repressor Protein Blocks Neural Stem Cell Development A protein known to repress
gene transcription at the molecular level in a variety of processes also blocks embryonic neural stem cells from differentiating into neurons, according to a study by University of California, San Diego and Howard Hughes Me...
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But in a recent study, researchers described a balancing act that seems
more counterintuitive than most: Bacterial cells prioritize
transcription — the process of making RNA transcripts of
genes as the first step in protein production — over repairing double - strand breaks in their DNA.
What's
more, one
transcription factor typically targets thousands of genomic locations in the cell and changes
gene expression at each location.
A few receptor
genes have
more than 8 different isoforms (38 VRs and 10 ORs), however in most of these cases this is due to the presence of several
transcription start sites (TSS) or exons that differ in length by just a few nucleotides, so several of the final transcripts differ only very slightly (Figure S7B).
In fact, CH methylation within a
gene correlated
more highly with repression than inaccessibility of DNA to
transcription machinery (as measured by the ability of a transposase to grab onto
genes).
Among the 2857 common
genes (CDS and ncRNA),
more than 85 % of those in strain GP59 showed no significant difference in the
transcription levels (< 2-fold difference in TPM)(Data S4) with their counterparts in strain JAM1.
BGEM contains images for
more than 400
genes with DNA binding and / or
transcription factor activity, and
more than 300
genes with protein translation and protein transport activity.
More recently, a common variable number tandem repeat (VNTR) polymorphism lying 1.2 kb upstream of the
transcription initiation site of MAOA has been shown to affect transcriptional activity of the
gene in transfected cells.