Understanding the role of
these noncoding mutations is a «challenging task,» says Ivan Iossifov, associate professor at Cold Spring Harbor Laboratory in New York, who was not involved in the study.
Not exact matches
«The elephant results revealed
noncoding sequences in the human genome that we predict may control gene activity and reduce the formation of
mutations and cancer.»
An oncogenic super-enhancer formed through somatic
mutation of a
noncoding intergenic element
Most of the
mutations identified in the new work land in genes, but some affect
noncoding regions of the genome.
At first, Sprecher suspected that either they had performed the genetic analysis incorrectly or the missing
mutation was hiding in a
noncoding or «junk» region of the genome.
The team then bred the mice and checked their offspring for DNA
mutations.The mice born to males that breathed unfiltered air had up to 2.8 times more
mutations in particular stretches of
noncoding DNA than did mice with fathers that breathed filtered air, or clean air at a rural site.
But full sequencing will soon be just as cheap as exome sequencing and will catch disease
mutations in
noncoding regions as well, Gibbs notes.
One of the
noncoding de novo
mutations was 254 kilobases downstream of FGFR2, in a
noncoding region that looks (according to chromatin marks) like a neural crest enhancer.
The researchers zeroed in on a single - nucleotide polymorphism (SNP) that appeared to be the causal
mutation, typically consisting of an adenine nucleotide but appearing as a guanine nucleotide in roughly a third of the population, located in a region of
noncoding DNA that falls within the PHACTR1 gene.