While circulating tumor DNA tests targeting a smaller set of cancer genes are already available for use in routine practice to guide care, by covering a much larger
number of cancer genes, this high - intensity sequencing approach may enable development of future tests for early detection of cancer.
In an effort to expand
the number of cancer gene mutations that can be specifically targeted with personalized therapies, researchers at University of California San Diego School of Medicine and Moores Cancer Center looked for combinations of mutated genes and drugs that together kill cancer cells.
Not exact matches
At last year's Brainstorm Health conference in San Diego, Bergh found himself sitting at dinner with Othman Laraki, the cofounder and CEO
of Color Genomics — a company that extracts the DNA from a customer's submitted saliva sample and then looks for a set
number of gene mutations known to be associated with increased risk for developing certain hereditary
cancers or heart conditions (depending on the test).
Whether investigating fat cells, immunotherapy or use
of the CRISPR - Cas 9
gene - editing tool, which a federal panel recently approved for a select
number of patients suffering from three types
of cancers, including multiple myeloma, approaches beyond attacking
cancer cells are needed in the fight against many
cancers.
PE: To progress toward
cancer, you need a few specific
genes to be mutated, within a limited
number of cell divisions, to cause the cells to divide uncontrollably.
Among patients with non-small cell lung
cancer (NSCLC) fueled by ALK
gene alterations who were being treated with crizotinib (Xalkori), a decrease in the
number of circulating tumor cells (CTCs) harboring increased copies
of the ALK
gene over the first two months
of treatment was associated with increased progression - free survival.
In this research, the group looked at two variants
of miR - 21, a microRNA «oncomiR» known to target tumor suppressor
genes and which is highly expressed in a
number of cancers as well as other proliferative diseases such as psoriasis.
A
number of these
genes are involved in
cancer and developmental abnormalities, he says, and «they may explain how some
of these conditions came to be.»
Further, a significant percentage
of these complex mutations are found in well - known
cancer genes that could be targeted by existing drugs, potentially expanding the
number of cancer patients who may benefit.
We identified a large
number of such events in critical
cancer genes.
They found that the
number of copies
of lncRNA
genes on a chromosome consistently change in 12 different
cancer types and lncRNA
genes are widely expressed in
cancer cells.
Using clinical, genetic, and
gene expression data as filters to distinguish
genes whose copy
number alteration causes
cancer from those for whom copy
number changes are incidental, the team whittled down their list from 14,000 to a more manageable
number, each
of which they systematically tested using genetic experiments in animals.
The analysis by our unique collaboration indicates that the
cancer risk in these relatively benign early lesions is determined by the
number of abnormal clones that has been established in the Barrett's mucosa, rather than by specific
gene abnormalities.»
A comprehensive genomic analysis
of Wilms tumor — the most common kidney
cancer in children — found genetic mutations involving a large
number of genes that fall into two major categories.
Because
of the urgent needs
of a large
number of cancer patients, most
of these
gene therapy trials are directed against
cancer.
«A
number of researchers had been looking for the
genes related to breast
cancer and knew where the
genes were likely to be,» says Arupa Ganguly, a geneticist at the Hospital
of the University
of Pennsylvania and one
of the plaintiffs in the ACLU suit.
In this study, researchers assessed the outcomes
of 280 prostate
cancer (Cap) patients, and reviewed the DNA «fingerprints»
of each patient's tumor (using the patient's initial diagnostic core biopsy) to determine if
gene copy
number alterations (CNAs), or breaks in CFSs, were related to a less positive response to treatment.
UroSEEK uses urine samples to seek out mutations in 11
genes or the presence
of abnormal
numbers of chromosomes that would indicate the presence
of DNA associated with bladder
cancer or upper tract urothelial
cancer (UTUC).
«We identified a
number of new
genes that are frequently mutated in CS,» said senior author Alessandro Santin, M.D., professor
of obstetrics, gynecology and reproductive sciences at Yale School
of Medicine, and program leader
of the gynecological
cancers research program at Smilow
Cancer Hospital at Yale - New Haven and a member
of Yale
Cancer Center.
They discovered that the
number of tumor suppressor
genes or oncogenes in a chromosome correlated with how often the whole chromosome or part
of the chromosome was deleted or duplicated in
cancers.
«Targeting a
number of these
genes simultaneously might be a potent new broad - spectrum therapy for
cancer.»
A study published online 10 October in Nature Genetics provides the strongest evidence yet for the starting gun theory by showing that mutations in a
gene involved in ensuring proper
numbers of chromosomes result in childhood
cancer.
Offspring that inherited the triplicated
genes and the genetic susceptibility to
cancer had only half the
number of intestinal tumors as their
cancer - prone parents, and the tumors that did develop were smaller, the team reports in the 3 January issue
of Nature.
Previous genetic studies have examined the association
of aspirin, NSAIDs, or both with colorectal
cancer according to a limited
number of candidate
genes or pathways.6 - 10 Thus, to comprehensively identify common genetic markers that characterize individuals who may obtain differential benefit from aspirin and NSAIDs, we conducted a discovery - based, genome - wide analysis
of gene × environment interactions between regular use
of aspirin, NSAIDs, or both and single - nucleotide polymorphisms (SNPs) in relation to risk
of colorectal
cancer.
423
Number of genes in the human genome that have been implicated in
cancer, according to the Sanger Institute's Cancer Gene C
cancer, according to the Sanger Institute's
Cancer Gene C
Cancer Gene Census.
The study showed that a
number of known
cancer gene mutations, such as APC, PI3KCA, SRC and p53, exercise their effects through microRNA 135b.
Reuters reports that «the activity
of disease - preventing
genes increased while a
number of disease - promoting
genes, including those involved in prostate
cancer and breast
cancer, shut down, according to the study published in the journal Proceedings
of the National Academy
of Sciences.»
Because you have her whole genome, and not just a test for a single
gene, you can potentially look for a vast
number of other
gene variants that raise the risk
of other diseases
of adulthood, such as the BRCA1
gene for breast
cancer.
Probably a
number of embryonic
genes, after being turned off for decades, are reexpressed in
cancer cells, enabling those cells to regain their embryonic capacity to move around and invade other tissues.»
If you look at the most clear indication
of homologous recombination deficiency — loss
of BRCA1 or BRCA2
cancer genes, either in the inherited germline or the tumor itself — that
number is close to 25 %
of ovarian
cancers.
However, such CRISPR screens are sensitive to a phenomenon called the copy
number effect, where
genes that have been repeatedly duplicated within a cell (as commonly happens in
cancer cells) can be flagged as essential regardless
of whether they are or not.
«Basically, this study shows that the genetic makeup
of individual human embryonic stem cell lines is unique in the
numbers of copies
of certain
genes that may control traits and things like disease susceptibility,» said Teitell, who also is an associate professor
of pathology and laboratory medicine and a researcher at UCLA's Jonsson Comprehensive
Cancer Center.
All
of the significant regions had been previously reported / validated; they included or were proximal to a
number of well - known
cancer genes including EGFR, CCND1, KRAS, MDM2, PDGFRA, and others.
A research team led by an award - winning genomicist at Western University has developed a new method for identifying mutations and prioritizing variants in breast and ovarian
cancer genes, which will not only reduce the
number of possible variants for doctors to investigate, but also increase the
number of patients that are properly diagnosed.
«Simultaneous mutation detection, copy
number measurement, and digital
gene expression profiling
of high - grade serous ovarian
cancer FFPE samples using Hyb & SeqTM targeted sequencing technology»
Moreover, many human tumors have highly abnormal
numbers of chromosomes (that is, they are aneuploid), with initial chromosomal loss participating in the early steps
of the transformation cascade in inherited
cancers caused by heterozygous mutation in tumor suppressor
genes and the more widespread aneuploidy characteristic
of advance tumors thought to drive acquisition
of malignant growth properties.??
To increase the
number of women who will benefit from genetic testing for breast
cancer, Rogan says doctors and government policy makers should include additional
genes in testing and consider new approaches that can interpret complete
gene sequences.
A
gene screen revealed a
number of genetic changes in the first (daughter) and third (great granddaughter) high - fat mice generations, including several linked to increased breast
cancer in women, increased resistance to treatment, poor prognosis, and impaired anticancer immunity.
The
Cancer Gene Census (CGC) database contains 547 such gene across various cancer types.5 Remarkably, few driver genes having specific point mutations appear to be sufficient to rewire signalling networks in cancer, 1 which at the same time shows that — at least from the mutational side — cancer does not consist of an «infinite» number of different diseases, and in many cases treatment options targeted against driver genes might be transferred from one case to the
Cancer Gene Census (CGC) database contains 547 such gene across various cancer types.5 Remarkably, few driver genes having specific point mutations appear to be sufficient to rewire signalling networks in cancer, 1 which at the same time shows that — at least from the mutational side — cancer does not consist of an «infinite» number of different diseases, and in many cases treatment options targeted against driver genes might be transferred from one case to the n
Gene Census (CGC) database contains 547 such
gene across various cancer types.5 Remarkably, few driver genes having specific point mutations appear to be sufficient to rewire signalling networks in cancer, 1 which at the same time shows that — at least from the mutational side — cancer does not consist of an «infinite» number of different diseases, and in many cases treatment options targeted against driver genes might be transferred from one case to the n
gene across various
cancer types.5 Remarkably, few driver genes having specific point mutations appear to be sufficient to rewire signalling networks in cancer, 1 which at the same time shows that — at least from the mutational side — cancer does not consist of an «infinite» number of different diseases, and in many cases treatment options targeted against driver genes might be transferred from one case to the
cancer types.5 Remarkably, few driver
genes having specific point mutations appear to be sufficient to rewire signalling networks in
cancer, 1 which at the same time shows that — at least from the mutational side — cancer does not consist of an «infinite» number of different diseases, and in many cases treatment options targeted against driver genes might be transferred from one case to the
cancer, 1 which at the same time shows that — at least from the mutational side —
cancer does not consist of an «infinite» number of different diseases, and in many cases treatment options targeted against driver genes might be transferred from one case to the
cancer does not consist
of an «infinite»
number of different diseases, and in many cases treatment options targeted against driver
genes might be transferred from one case to the next.
To understand the selection mechanism behind mutations, network - based studies were used to estimate the importance
of a mutated protein compared to non-mutated ones in signalling and protein — protein interaction networks.10, 11,12,13 Proteins mutated in
cancer were found having a high
number of interacting partners (i.e., a high degree
of connectivity), which indicates high local importance.10 Mutated proteins are also often found in the centre
of the network, in key global positions, as quantified by the
number of shortest paths passing through them if all proteins are connected with each other (i.e., they have high betweenness centrality; hereafter called betweenness).11, 12 Mutated proteins also have high clustering coefficients, which means their neighbours are also neighbours
of each other.10, 13 Moreover, neighbourhood analysis
of mutated proteins have been previously successfully used to predict novel
cancer - related
genes.14, 15 However, to the best
of our knowledge, no study has concentrated particularly on the topological importance
of first neighbours
of mutated proteins in
cancer, and their usefulness as drug targets themselves.
Fasting has a
number of health benefits, including improved cardiovascular health, reduced
cancer risk,
gene repair, and increased longevity
Fasting, it turns out, has a
number of health benefits that most people seek: from improved cardiovascular health and reduced
cancer risk, to
gene repair and longevity.
A recent study
of over 35,000 breast
cancer survivors published in the American Cancer Society's journal Cancer found that multi-gene testing can reveal DOUBLE the number of high - risk gene mutations as compared to testing BRCA1 / 2 a
cancer survivors published in the American
Cancer Society's journal Cancer found that multi-gene testing can reveal DOUBLE the number of high - risk gene mutations as compared to testing BRCA1 / 2 a
Cancer Society's journal
Cancer found that multi-gene testing can reveal DOUBLE the number of high - risk gene mutations as compared to testing BRCA1 / 2 a
Cancer found that multi-
gene testing can reveal DOUBLE the
number of high - risk
gene mutations as compared to testing BRCA1 / 2 alone.1
TUESDAY, March 28, 2017 (HealthDay News)-- An increasing
number of American women who don't have breast or ovarian
cancer are being tested for BRCA and BRCA2
gene mutations associated with those diseases, a new study shows.