Sentences with phrase «of clade b»

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This included a strongly supported clade (100 % BS on most branches) that comprised the three groups of vocal learners (parrots, songbirds, and hummingbirds) and most of the nonpredatory core landbirds, a monophyletic clade of diurnal birds of prey and seriemas (albeit with low 40 % BS), and a monophyletic clade of all aquatic and semiaquatic species of Passerea and Columbea (also with low 20 % BS)(Fig. 4D).

Within core landbirds, we found 100 % BS for a previously more weakly supported clade (Australaves) containing seriemas (historically placed in Gruiformes), falcons (historically grouped with other diurnal birds of prey), parrots (historically difficult to place), and Passeriformes and a sister clade (Afroaves) containing Accipitrimorphae birds of prey, owls, mousebirds, woodpeckers, and bee eaters, among others (Fig. 1)(8, 17, 26, 29, 60).

Blue - green signifies the monophyly of a clade, and shades show the level of its BS (0 to 100 %).

There were only local shifts of five clades, nearly all on lower - support (< 100 % BS) branches of the ExaML and MP - EST * TENTs (Fig. 3, A and B).

Using mutation rates as a molecular clock, the authors determined that the ancestor of clade A jumped from a bovine host to humans between 1894 and 1977 and clade B made the jump between 1938 and 1966.

Transferable vancomycin resistance in clade B commensal - type Enterococcus faecium — François Lebreton — Journal of Antimicrobial Chemotherapy

ENVELOPE PLASMID: Bal.26 Tier: 1 Clade: B Country of origin: USA Fiebig Stage: VI Mode of Transmission: Accession number: Pending

ENVELOPE PLASMID: Bx08.16 Tier: 1 Clade: B Country of origin: France Fiebig Stage: VI Mode of Transmission: - Accession number: GQ855765

Envelope Plasmid: QH0692.42, Tier: 2, Clade: B, Country of origin: Trinidad, Fiebig Stage: V, Mode of Transmission: F - M, Accession number: AY835439

Envelope Plasmid: TRO.11, Tier: 2, Clade: B, Country of origin: Italy, Fiebig Stage: IIII, Mode of Transmission: M - M, Accession number: AY835445

Envelope Plasmid: AC10.0.29, Tier: 2, Clade: B, Country of origin: USA, Fiebig Stage: III, Mode of Transmission: M - M, Accession number: AY835446

Envelope Plasmid: SC422661.8, Tier: 2, Clade: B, Country of origin: Trinidad, Fiebig Stage: IV, Mode of Transmission: F - M, Accession number: AY835441

Recombinant gp140 envelope protein from the HIV - 1 clade C / B» strain CN97001 (clone CN54); the envelope protein is of clade C origin, accession number AF286226, terminating at ALDSWKN.

Because the polyT repeat is reported as the key variant to define TOMM40 clades A and B, 12 we used this marker and APOE isoform information to perform analyses based on phylogenetic groups as described by Roses et al. 12 Haplotype phase was estimated using PHASE software.22 The phylogeny, which represents the evolutionary relatedness of the haploytpes, was estimated using neighbor - joining with 10 000 bootstrapping replicates in the CLC DNA workbench (CLC bio, Aarhus, Denmark)(Supplemental Figure 3; http://neuroscienceresearch.wustl.edu/Pages/cruchaga2011.aspx).

Association of APOE 3 — TOMM40 clade A and B haplotypes with case - control status was performed using a Fisher exact test.

Different strains or «clades» of the virus are recognised, and their prevalence varies internationally, with subtype A being the most common in the UK and Ireland, and subtype B being more common in the United States.

Glacial climatic fluctuations caused habitat changes, including the appearance of continental ice sheets as far south as Washington State [37], that may have caused range shifts in locally adapted gray fox populations, with foxes with clade B haplotypes existing as far south as southern California.

Our estimates of divergence suggest that clades A and B diverged approximately 22,900 years ago (95 % Highest Posterior Density [HPD]: 35,300 — 13,500).