Its Italian counterpart has condemned the patenting
of gene fragments «of unknown function», and the Italian senate is believed to have instructed publicly funded laboratories not to send data to the database.
Similar to a key that fits a lock, the scissors only fit a specific pattern
of gene fragments that may serve as a genetic fingerprint for the species searched.
Not exact matches
«Recombinant DNA technology», «DNA cloning», «molecular cloning» or «
gene cloning» all describe the process
of transferring a DNA
fragment from one organism to a self - replicating genetic element (a cloning vector) such as a bacterial plasmid, enabling the
fragment to be propagated in an alien host.
In SIF - seq, hundreds or thousands
of DNA
fragments to be tested for enhancer activity are coupled to a reporter
gene and targeted into a single, reproducible site in embryonic cell genomes.
He extracted DNA from various species in order to clone
fragments of genetic material to look for specific
gene expression.
Using this technique, the team first identified millions
of short
fragments of RNA located at the start
of genes — at the so - called «5 [prime]» end, where
genes are switched on.
Hendrik recovered several short
gene fragments, which represented just one - ten - thousandth
of 1 percent
of the bee's total genetic information.With George as a co-author, it was Hendrik's first scientific paper, published in Medical Science Research in 1992.
At the time, George had begun collaborating with molecular biologist Allan Wilson, a colleague at Berkeley who had just cloned
gene fragments from the 140 - year - old pelt
of a quagga, an extinct brown - and - white - striped zebra relative.
In a nonhuman primate model geneticist Anthony Chan DVM, PhD, and his colleagues at Yerkes developed, rhesus macaques carry a
gene encoding a
fragment of mutant human huntingtin.
The Tetrahymena intervening sequence (IVS) has been inserted into the
gene for the alpha - donor
fragment of beta - galactosidase in a recombinant plasmid.
Dr. Satish Rattan, Professor in the Department
of Medicine, Division
of Gastroenterology and Hepatology at Jefferson's Sidney Kimmel Medical College, together with Drs. Jagmohan Singh and Ipsita Mohanty, used altered copies
of the body's own genetic make - up — small RNA
fragments (microRNAs) that regulate the target
gene RhoA / ROCK — in order to strengthen or weaken the muscle tone
of the sphincter.
As mere
fragments of genes, ESTs by themselves generally have no intrinsic function in an organism.
No. 5,817,479, entitled Human Kinase Homologs, claims 44 ESTs which are
fragments of genes encoding protein kinases.
The team employed a technique called Southern blotting to examine
fragments of the BRCA1
gene that are much larger than the tiny snippets scanned by the polymerase chain reaction (PCR) in commercial tests.
«The
gene has been cloned, and we know it interferes with the production
of toxic amyloid
fragments,» says Ralph Nixon, a professor
of psychiatry and cell biology at New York University School
of Medicine and a past chair
of the Medical and Scientific Advisory Council
of the Alzheimer's Association.
The target
fragment binds to a
gene switch in the DNA, which triggers the production
of a colourful substance such as the protein that gives jellyfish a green glow under ultraviolet light, or proteins from bacteria that produce colour changes visible to the naked eye.
They checked that the viral
gene fragments in the child and mother were a close match, and double - checked that the samples
of blood cells from the child were his and no one else's, by matching them genetically with the mother.
But now that increasingly powerful genomic technology can definitively identify a species from a
fragment of bone or uncover Neanderthal
genes embedded in the DNA
of modern humans, there is less room for debate.
But when they tested the boy again at 12 months, all traces
of both the protein and the
gene fragments had gone, and the child had no antibodies to HIV.
Expression
of the adiponectin
gene was reduced in the offspring
of sleep -
fragmented mothers, especially in their visceral fat cells.
Jon Wetton and his co-workers at the Forensic Science Service believe that amplifying
fragments of the cytochrome b
gene of the tiger's mitochondrial DNA may fill the bill.
Upon sequencing the DNA, they found that DNA
fragments containing mutated
genes — markers
of tumors — were typically smaller than healthy versions
of the
gene from within the same patient.
The researchers also found differences in microRNA expression in bipolar cells — tiny
fragments of RNA that play key roles in the «reading»
of genes.
In
gene - baiting, scientists use targeted PCR primers to amplify specific
genes during the library preparation step, rather than amplifying all
of the DNA
fragments in the sample.
As Gary Stix reviewed in «Owning the Stuff
of Life,» in the February issue, companies and universities have been on a spree
of patenting not only whole
genes but also genetic
fragments of unknown utility.
To expedite the cutting - and - pasting
of fragments of DNA, the pioneers
of the method inserted a human growth hormone
gene alongside other modified DNA.
But rather than delivering the entire
gene for the clotting - factor proteins to cells, as most
gene therapies do, the researchers used the viruses to engineer immune - regulating B cells to express a
fragment of the clotting factor fused to an immune molecule called an immunoglobulin.
«Telomerase is a unique protein - RNA complex where the protein subunit uses its RNA component as a template to add identical
fragments of DNA to the end
of chromosomes,» said Emmanuel Skordalakes, Ph.D., associate professor in the
Gene Expression and Regulation program
of Wistar's NCI - designated Cancer Center.
Some
of the
genes contained
fragments of DNA that are also known to be an important part
of the innate immune system in plants, mammals and invertebrates.
Next, they put the samples into an instrument called a DNA sequencer — which automatically analyzes genetic material — to read short viral
gene fragments millions or even billions
of times.
The issue
of whether a meager
gene pool can lead to extinction in already
fragmented populations has provoked «a hell
of a lot
of controversy,» says Richard Frankham
of Macquarie University in Australia.
In the study,
fragments of the virus that were not infectious were used to study viral
gene expression.
In the 1980s, molecular biologist Allan Wilson
of Berkeley managed to clone
gene fragments from the 140 - year - old pelt
of a quagga, an extinct brown - and - white - striped relative
of the zebra.
Fragments of genetic material called transposons, or «jumping
genes,» inserted themselves long ago in the human genome and have been a powerful force in our evolution, Tina Hesman Saey reported in «The difference makers» (SN: 5/27/17, p. 22).
The research team found that this non-coding RNA
fragment maintains healthy cells through two mechanisms: Firstly by regulating the levels
of DIRAS3, one
of its neigboring
genes that is involved in cell replication; secondly by suppressing a network
of genes that prepare cells to change their shape and prepare for metastasis.
That team did find remnants
of chloroplast
genes, but those
gene fragments belonged to the vine that this parasitic plant lives off.
But it was still quite different from the
gene fragments of Asian, African, and European humans, which were all very similar to one another.
A number
of these trials represent completely novel classes
of therapy, such as employing
fragments of RNA that interfere with problem
genes or developing vaccines meant to quell drug addiction.
Finally, small beads are used to sort the mixture
of DNA
fragments into the right combinations to make longer
genes, and the sections are combined.
Extracts from the brains
of FFI patients transmitted disease to transgenic mice expressing a chimeric human - mouse PrP
gene about 200 days after inoculation and induced formation
of the 19 - kilodalton PrPSc
fragment, whereas extracts from the brains
of familial and sporadic Creutzfeldt - Jakob disease patients produced the 21 - kilodalton PrPSc
fragment in these mice.
During the 1990s, a team led by Jeffery Taubenberger at the Armed Forces Institute
of Pathology in Washington, D.C., sequenced key
gene fragments of the 1918 flu strain, recovered from frozen victims found in the Alaskan permafrost and in archived autopsy material.
In an e-mail to ScienceInsider, Yang Bicheng, director
of BGI's marketing department, wrote that one
gene fragment appears to have come from another food - borne pathogen, Salmonella enterica, while other
genes are highly homologous to those found in other, phylogenetically distinct E. coli strains, including a strain called O25: H4 - ST131.
The technique is well established for many crops, and particle bombardment is less predictable, often yielding multiple,
fragmented insertions
of the new
gene.
To gain access to the
gene - containing portion
of the barley genome at high resolution, Close and his team identified and sequenced 15,622 BACs or bacterial artificial chromosomes — small
fragments of the barley DNA linked to other DNA to constitute a circular molecule that can replicate and be propagated inside an E. coli bacterial cell, enabling researchers to produce copies
of each BAC for DNA sequencing one small piece
of the barley genome at a time.
This will give way to the development
of a drug to be used in
gene therapy against neurodegenerative diseases based on small molecules which enhance the expression
of the
gene and / or the use
of fragments of the Klotho protein itself.
So the scientists constructed a protein
fragment based on a DNA sequence made up
of bases complementary to those
of the PrP
gene, and then developed an antibody to the protein
fragment.
With the remains from Punta Azul, the researchers used a
fragment of the amelogenin
gene.
Using a slew
of molecular techniques, the team identified the color - stealing culprit in white grapes as a mobile
fragment of DNA, called a retrotransposon, which inserts itself into the
gene controlling pigment production.
Shotgun sequences random
fragments of DNA, not one consistent
gene, so it requires researchers to have a strong database they can use to match the sequences to an organism.
The
fragments are too small to hold a full
gene, but could carry a promoter to switch others on, says Laura Weyrich
of the Australian Centre for Ancient DNA in Adelaide.