Now researchers in California and Virginia have identified symbiotic bacteria living on amphibians» skins that protects them from the deadly fungal disease, and later this summer the scientists will collect
some of the microbial samples, culture them in the lab, and use the product to inoculate some frogs in California's Sierra Nevada to see if the approach stops chytrid in the wild.
Not exact matches
A
sample of your
microbial makeup from fecal material, the mouth, or even your forehead can be genetically tested to figure out which bacteria are in your gut microbiome, and whether it's diverse or not.
One 2013 study found significant
microbial contamination in breast milks
samples purchased online, concluding that mothers should avoid use
of donated or sold breastmilk and suggesting further use
of lactation services as the solution to increasing breastfeeding rates.
These
samples will help educate researchers on the impact
of water re-use systems on
microbial diversity.
Quiz Ref IDWe sequenced the V4 - V5 regions
of the bacterial 16S rDNA to characterize the
microbial communities present in a stool
sample from each study participant at 6 weeks
of age.
Hospital doctors will have to take
microbial samples from patients suspected
of infections before signing a prescription.
Back at the lab, they found that Jüttner's words were prescient: After culturing the
microbial communities, the lake
sample registered traces
of toluene.
The scientists detected some evidence
of fossil insect DNA in amber
samples, but they couldn't rule out contamination by
microbial or human DNA.
The virus was found when Bas Dutilh
of Radboud University Medical Center in Nijmegen, the Netherlands, and colleagues were trawling through data from faecal
samples collected for a 2010 study looking at the
microbial gut communities
of twins.
Dr Bayrakci and the team will collect cores
of rocks and take fluid and
microbial samples using two specialist robot drills.
The oozy red slush
of Blood Falls in Antarctica's McMurdo Dry Valleys contains teeming
microbial life — and may be a
sample of a deep briny groundwater system hundreds
of meters below the surface.
Evidence
of a past environment well suited to support
microbial life came within the first eight months
of the 23 - month primary mission from analysis
of the first
sample material ever collected by drilling into a rock on Mars.
Currently, researchers analyze
microbial diversity by taking a
sample they hope includes the different kinds
of bacteria in the gut.
Besides
microbial ecology, fields that rely on global sharing
of samples, data, and methods include climate science, geophysics, and health and science policy.
Though degraded, multitudes
of ancient
microbial DNA fragments, some 8 million years old, were suspended inside the ice
samples.
«But what I find most interesting in Parkes»
samples is the high density
of microbial cells.
In search
of microscopic life, molecular ecologist Kay Bidle
of Rutgers University looked for
microbial DNA in the soil and ice core
samples Marchant gathered for him during one
of his expeditions.
Dominquez - Bello, along with Jean Ruiz and colleagues, discovered that they could predict the functional spaces
of homes just by analyzing the
microbial samples, and that these predictions became more accurate with increased urbanization.
Nathan Cude works in Novozymes» agbiotech division in Durham, North Carolina in the
microbial discovery group, which isolates and identifies thousands
of microbes collected from soil
samples around the United States.
If we can collect a
sample of the water, we may determine whether
microbial life exists, how it evolved, and how it continues to live in this cold environment with no connection to the atmosphere.»
Researchers noticed this pattern after
sampling the
microbial communities found in the saliva, skin and feces
of 37 Komodo dragons across 12 U.S. zoos as well as the environment
of two
of the 12 enclosures.
Microbial ecologist Terry Hazen
of Lawrence Berkeley National Laboratory (LBNL) and his colleagues used two ships to collect 200
samples from 17 deep water locations between May 25 and June 2.
We analyzed 7.2 terabases
of metagenomic data from 243 Tara Oceans
samples from 68 locations in epipelagic and mesopelagic waters across the globe to generate an ocean
microbial reference gene catalog with > 40 million nonredundant, mostly novel sequences from viruses, prokaryotes, and picoeukaryotes.
It involved intensive molecular testing
of swab
samples from 87 women who had acquired HIV infection and
of 262 who did not, and sophisticated analysis comparing the vaginal
microbial communities in each
of those groups.
By using a
sampling kit and answering a few questions, volunteers help researchers create an atlas
of microbial diversity in homes across the country.
With KatharoSeq, the researchers improved their level
of microbial detection about two orders
of magnitude and increased the rate at which they can process
samples about five-fold, as compared to standard
sampling and sequencing methods.
By discovering what kind
of life inhabits Antarctic lakes, John Priscu — a
microbial ecologist at Montana State University in Bozeman who is analyzing
samples from Lake Whillans — hopes to understand what sort
of technology will be needed when probes are eventually sent to those frozen moons.
He was game to research the
microbial communities he would encounter on his journey, and every day after he made what he called a «tripmark,» a tire tread imprint on a piece
of paper with location information and notes (above), he filled three vials
of dirt and sent them back to Nagler at the University
of Innsbruck, providing her with a rare opportunity to examine many
samples of microbes from a broad geographic range.
Multiyear incubation experiments with
samples of host rock confirmed the
microbial activities measured in situ.
Part
of the challenge in finding Loki
samples is that they tend to be few in number, a rare figure in local
microbial ecosystems.
The kinds
of species were fairly consistent across
sampling sites, which suggests there's something
of a native
microbial community that can survive in this salty sand by going dormant between periods
of moisture, says Schulze - Makuch.
Related work by DeBruyn, Kathleen Hauther, a doctoral student in DeBruyn's lab, and others suggests that
microbial sampling of the human gut itself might also serve as a time - since - death stamp.
The researchers sequenced the
microbial cloud
samples and saw that many
of the participants had the same bacteria in their clouds, but in different concentrations.
None
of the
samples in the study contained
microbial species or cells concentrations that present a public health risk.
They also looked at the total repertoire
of genes in the
sampled DNA to assess how well the
microbial community was working.
The researchers analyzed DNA fragments in the
samples to show that the
microbial populations varied from region to region, even on the same variety
of grape.
Collaborators at Human Longevity, Inc. sequenced the
microbial genes extracted from each participant's stool
sample and used that information to determine which species were living where, and the relative abundance
of each.
They sent soil
samples for DNA testing, looking for matches with particular genes known to be found in microbes and fungi; they tried to stimulate
microbial growth on a wide variety
of substances and then count the cells produced; and they used highly sensitive radiorespiration activity assays, which involve feeding the soil microorganisms a food source which has been labelled with radioactive carbon, which can then be used to detect if the microorganisms are active.
The researchers used 16s rRNA sequencing to characterize the
microbial population in stool
samples donated by 19 inhabitants
of the Hamlet
of Resolute Bay, a Canadian Arctic village on the southern end
of Cornwallis Island accessible only by plane (and, when the sea ice breaks up, by boat).
To detect NAFLD earlier and more easily, researchers in the NAFLD Research Center at University
of California San Diego School
of Medicine, Human Longevity, Inc. and the J. Craig Venter Institute report that the unique
microbial makeup
of a patient's stool
sample — or gut microbiome — can be used to predict advanced NAFLD with 88 to 94 percent accuracy.
Called the Ambrose Monell Collection for Molecular and
Microbial Research, the lab is home to thousands
of frozen microscopic genetic
samples.
Based on their genetic material, the researchers determined the relative abundance
of a range
of microbial species in the
samples.
Lead author
of the research Dr Kelly Redeker from the Department
of Biology at the University
of York said «As
microbial activity and its influence on its local environment has never been taken into account when looking at ice - core gas
samples it could provide a moderate source
of error in climate history interpretations.
Research reported in the Journal
of the Royal Society Interface, which has directly observed
microbial activity in Antarctic and Arctic snow, has revealed that the composition
of these small
samples of gas trapped in the ice may have been affected by bacteria that remain active in snow while it is being compressed into ice — a process that can last decades.
But when his team compared DNA sequences from the bacteria in the rock
samples with those available in databases, he discovered an entire
microbial ecosystem consisting
of a wide variety
of both archaebacteria and eubacteria, common «modern» bacteria that normally take up residence in lush places such as cheese and humans.
The researchers amplified
microbial DNA from the
samples, then looked at the abundance
of various types
of microbes.
To better understand the
microbial diversity
of these environments, researchers from the University
of Manitoba isolated AAP strains from soil
samples at four different sites within the Central Gold Mine tailings.
The next step in the research was to
sample the rhizosphere, the soil in the region around the roots
of rice plants growing in the field, to reveal the
microbial community living there and to attempt to elucidate their roles.
Samples of Sargasso Sea water have given scientists a new appreciation
of microbial diversity.
Simultaneous sequence analysis
of all organisms in filtered
samples from the Sargasso Sea indicates the presence
of over 1800 species, with unexpectedly large
microbial diversity.