By comparing this plant's DNA with
other plant genomes, researchers are getting a stronger sense of how flowering plants came to dominate Earth.
Although the Arabidopsis sequence can itself serve as a guide to
other plant genomes, plans are underway to sequence the rice genome and researchers are debating the merits of sequencing maize and other crops.
Not exact matches
The resulting backcrossed
plants and information about their
genomes, «shows a way forward for improving chickpeas and many
other crops too,» says von Wettberg, a professor in UVM's Department of
Plant and Soil Science.
As for the identities of Mendel's
other four genes, Weeden says he expects them to be revealed in the next few years as more
plant genomes give up their sequences.
To fully understand a
plant's nuclear
genome, scientists must also study two
other genomes found within
plant cells — in the «powerhouse» mitochondria and in the photosynthesizing chloroplast organelles.
Defined narrowly — as a discipline distinct from
other areas of
plant biology —
plant genomics is the study of the organization of
genomes themselves.
«Our vision is to apply the same approach but rapidly screen non-synthetic, biological or «natural» molecules cloned from human or
other genomes, including those of
plants, animals and microbes,» he said.
Compared with earlier methods to tweak the
genomes of bacteria,
plants, laboratory mice and human cells, the Crispr - Cas9 gene - editing method is fast, precise and cheap, an order of magnitude better than the
others.
Other times, the desired trait, such as the ability to resist certain pests, can be absent in
plant genomes.
Over the longer term, the identification of the coffee tree
genome sequence opens up new possibilities for varietal improvement, knowledge of the specific functions of the genes (in particular those specific to coffee trees), the possibility of transferring results to
other species, and refining diagnostic tools for the function of the
plant.
One is that knocking out the excision repair system leads to an increase in
plant genome mutations even when the
plant is kept in the dark, away from UV or
other forms of light.
First, samples of leaves from these
plants are collected for in vitro cultures to isolate the fungi; then the DNA and RNA of fungi are extracted to sequence them and, through bioinformatic analysis, the researcher can determine the expression, the presence or absence of genes in the
genomes of a species against each
other.
Whole -
genome chips exist already for five
other organisms: the yeast Saccharomyces cerevisiae, the nematode Caenorhabditis elegans, the fruit fly Drosophila melanogaster, a
plant called Arabidopsis tumefaciens, and the gut bacterium Escherichia coli.
Still - unfunded plan would start with all
plants, animals, and
other eukaryotes — some 1.5 million species — for the cost of the original human
genome project
While looking for ways to make tomatoes and
other crop
plants more productive, BTI Assistant Professor Joyce Van Eck and former postdoctoral scientist Sarika Gupta developed a better method for «transforming» a tomato — a process that involves inserting DNA into the tomato
genome and growing a new
plant.
By consulting the database of the 1000
Genomes Project, the researchers found that the fused gene was evident in many diverse species of mosses, but not in
other plants.
Its 3.8 million bases include the complete mitochondrial
genomes of three green algae and one moss, as well as genes from
other plants, evolutionary biologist Jeffrey Palmer of Indiana University, Bloomington, and his colleagues report today in another paper in Science.
Much of the mitochondrial DNA
genome of the flowering
plant Amborella trichopoda originated from
other organisms.
But Amborella, which came later, has more: 36 MADS - box genes, and
other flowering
plants, which have undergone more whole
genome duplications, have even more still, the researchers report.
A few
other plants have big mitochondrial
genomes — Amborella's is six times the typical size — but none have so much foreign DNA.
Early
genome duplications in conifers and
other seed
plants, Science Advances (2015).
This work presents a genomic analysis of the UM270 gene functions as compared to
other available pseudomonad
genomes, highlighting the genetic and functional differences between each strain of this group of fluorescent and
plant growth - promoting bacteria.
Microbiologist Mark Morrison, an associate professor at Ohio State's Department of Animal Sciences who is the consortium's coordinator, says its main goals are to pinpoint those parts of the bacterial
genomes that play a role in degrading cellulose and
other plant polysaccharides, and also to identify
other genetic traits that are critical to the bacteria's colonization and persistence in the digestive systems of the host animals.
The sequencing of the tomato
genome has implications for
other plant species.
Now that the
genome sequence of one variety of tomato is known, it will also be easier and much less expensive for seed companies and
plant breeders to sequence
other varieties for research and development, he added.
We are investigating these and
other allied questions using evolutionary genomic approaches, by performing comparative analyses of
plant genomes, transcriptomes and proteomes.
They have also had an important role in projects to sequence the flowering
plant Arabidopsis thaliana (the first
plant genome sequence), the fission yeast Schizosaccharomyces pombe, as well as the human
genome and
other important
genomes.
Plant biologists have sequenced the
genome of a particularly promising species of green alga, providing a blueprint for new discoveries in producing sustainable biofuels, antioxidants, and
other valuable bioproducts.
Genome sequencing has helped scientists understand pets such as dogs and cats; agricultural animals like cows and pigs; crop
plants such as rice, corn, barley; and a host of
other living things.
How broadly this mode of evolutionary change is exploited in nature remains to be seen, but if the prevalence of repetitive elements within genes is any indicator, then mammals, insects,
plants, and
other genomes throughout the natural world may use this mechanism to achieve evolutionary agility.
Genome Alberta announced C$ 25.2 million (US$ 22.2 million) in public / private funding over four years for two new genomic research projects, one targeted at enhanced recovery of fossil hydrocarbon resources from oil sands and coal beds through biological processes, the
other focused on discovering
plant genes that can be sequenced and used... Read more →