Sentences with phrase «own microbiome data»

«We wanted to do something that had never been done, which was to gather this huge microbiome data set and generate value for suffering people,» she says.

Biotech's Encouraging Phase 2 Gut Microbiome Data «Bodes Well» for Phase 3 Source: Streetwise Reports (3/14/18) H.C. Wainwright & Co. analyst Ram Selvaraju reported the latest study findings involving this biotherapeutic firm's lead asset.

Franzosa and colleagues used publicly available microbiome data produced through the Human Microbiome Project (HMP), which surveyed microbes in the stool, saliva, skin, and other body sites from up to 242 individuals over a months - long period.

Further comparisons with western microbiome data showed that the Bantu microbiome composition falls on a spectrum between the BaAka and western populations.

Students who analyzed their own microbiome data reported spending 31 percent more time researching the microbiome than students who used demo data.

Along with the genomic data gleaned from the sequencing of complete human genomes, HLI will also be generating microbiome data for many of these individuals through its Biome Healthcare division, under the leadership of Karen Nelson, Ph.D..

«Other key public microbiome data management systems such as MG - RAST, IMG and GOLD have also adapted the MIxS standards,» said Nikos Kyrpides, head of the DOE JGI Prokaryote Super Program and GSC Board member.

Along with the microbiome data, HLI will capture and analyze each individual's metabolomic data.

Nephele: A cloud platform for simplified, standardized, and reproducible microbiome data analysis — Nick Weber — Bioinformatics — October 2017

Bioconductor Workflow for Microbiome Data Analysis: from raw reads to community analyses — Ben Callahan — F1000 Research — November 2016

Comparison of microbiome data from the alcohol model, BDL, CCl4, and an obesity model noted that there was no common liver disease microbiome, suggesting that the intestinal microbiome differs by etiology of liver disease.

Like our lab run a ton of microbiome data.

Not exact matches

«In our case we started off with consumers and citizen scientists, understanding the microbiome, and we found something in our data set that was really stunning and valuable,» she says.

Even in IBD patients, who have a very messed up microbiome (a finding of the American Gut data), the benefits of antioxidant therapy is well documented (see below studies).

«The newest data we have is on the infant gut microbiome: the «good» bacteria in our guts.

The contribution of the mode of delivery to the infant microbiome has been evaluated.13, 15,24 However, no study has examined the effects of delivery mode and breastfeeding following adjustment for the other, and, to our knowledge, there are few data on the effects of combination feeding (feeding breast milk and formula together).

If hormone surges are important for the microbiome transmission during labor and in breast milk, as the unplanned Cesarean data suggest, how could the natural hormone surges of labor be mimicked for planned Cesarean?

There are so many variables to the birth process that many of these questions could only be answered with extremely detailed data of tens of thousands of mother - infant - microbiome triads over time.

This is a highly limiting factor for research, because it complicates the annotation of data obtained by molecular techniques, and because it has been shown that gut microbiomes are to some extent specific to their host, and researchers have been using strains of other origin in mouse models.

When the team looked for it in data from the Human Microbiome Project, a large - scale project to sequence the DNA of all the microbes that live in and on our bodies, they found that it was present in 73 per cent of all 466 faecal samples.

Referring to these associations in bipolar subjects, Dr. Simon Evans concluded that, «The data support the hypothesis that targeting the microbiome may be an effective treatment paradigm for bipolar disorder.»

The researchers did a small study of existing genetic data from the human skin microbiome and estimate that 20 percent of the human population have S. epidermidis strains that make 6 - HAP on their skin, Gallo says.

But «one day,» Jackson says, «a genetic profile of our microbiome will be taken by doctors, with treatments prescribed from instant molecular data.»

France Córdova, director of the National Science Foundation, also addressed the forum, saying NSF's agenda over the next decade will come from «10 big ideas» including understanding the changing Artic, leveraging artificial intelligence, harnessing big data, developing quantum enabled technology, studying the microbiome and advancing research about gravitational waves.

«The microbiome of a cadaver is an unknown data set in biology,» she says.

To investigate, researchers from the Channing Division of Network Medicine at Brigham and Women's Hospital, led by Amir Bashan, PhD, and Yang - Yu Liu, PhD, analyzed data from large metagenomic datasets (e.g. the Human Microbiome Project and Student Microbiome Project) to look at the dynamics of the gut, mouth and skin microbiomes of healthy subjects.

When the researchers expanded their search to include all the data from the Human Microbiome Project, a large - scale project to sequence the DNA of all the microbes that live in and on our bodies, they found that the same virus was present in 73 per cent of all 466 human faecal samples.

«The microbiome is incredibly complex and has been the subject of intense study in the last few years, due to the development of deep sequencing and most importantly, due to the ability to analyze this complex data,» said Patterson.

ET: «What this data analysis pipeline, moreover, creates is motivation to look for similar forms of gene loss in other types of symbioses, such as that between humans and their gut microbiomes.

«We tend to think that the factors that determine where forests are on a landscape are largely driven by climate, but what these data show is soils and the soil microbiome community might be a lot more important than we have appreciated in the past,» she said.

Analyzing this wealth of data required overcoming the formidable bioinformatics challenge of sorting and identifying millions of genetic sequences like puzzle pieces in order to reconstruct the complex biology of the ancient oral microbiome.

«We are about six months away from having the data to completely describe the bacterial microbiome of grapevine tumors,» said Michael Savka, professor of biological sciences in the Thomas H. Gosnell School of Life Sciences at RIT, and organizer and contributor of the international study.

In addition, now that researchers have begun to understand how the microbiome changes in the ICU, Wischmeyer says the next step is to use the data to identify therapies — perhaps including probiotics — to restore a healthy bacterial balance to patients.

At the beginning of the semester, students were given the option to use their own personal information gained through a microbiome kit, or they could use demo data.

«Student class engagement soars when they use personal data to learn: Study finds students who used microbiome kits spent 31 percent more time engaged in course work.»

Michael Blaut, a microbiologist at the German Institute of Human Nutrition in Potsdam, Germany, says the mouse data are «believable and remarkable,» but says he has a hard time imagining a mechanism that would account for three compounds as chemically different as aspartame, saccharin, and sucralose leading to the same changes in the gut microbiome.

«Mining sequence data in DOE JGI's Integrated Microbial Genomes & Microbiomes system, which houses thousands of metagenomes, allowed us to find evolutionary relatives of our Klosneuvirus,» Schulz said.

The scientists analyzing this data concluded that diet and lifestyle are by far the most dominant factors shaping our microbiome composition.

Segal and Elinav believe that over time, with the further addition of data to their study and those of others, these recent findings may be further validated, and the connection between our microbiome, our genetics and our health will become clearer.

In addition to genetic data and microbiome composition, the information collected for each study participant included dietary habits, lifestyle, medications and additional measurements.

We also assess performance in real 16S data, where we reanalyze previous genetic association data to show that relative to other widely used quantification methods Karp reveals a larger number of microbiome quantitative trait association signals.

Actinobacterial community structure in the Polar Frontal waters of the Southern Ocean of the Antarctica using Geographic Information System (GIS): A novel approach to study Ocean Microbiome — P. Sivasankar — Data in Brief

«The data presented at AACR provide important new models and mechanistic insights that inform our planned development efforts to evaluate the ability of microbiome therapy to augment immune checkpoint inhibitors,» said David Cook, Ph.D., Chief Scientific Officer and Executive Vice President of Research at Seres.

«It was the first analysis of the gut microbiome among a foraging population, and the data indicated that some of our old longstanding ideas about the differences between «good» and «bad» gut bacteria needed to be re-evaluated,» she said.

Seres Therapeutics (MCRB) Presents New Preclinical Data Supporting the Development of Microbiome Therapeutics for Immuno - Oncology at AACR

The complete genome sequence data from the collected viruses will not only expand our knowledge of the virulence factors, but provide detailed information on evolution and transmission of RSV strains, host - pathogen interactions, and pathogen - microbiome relationships that occur during viral infection.

The data presented provide new insights on the potential mechanism by which Seres» microbiome therapies could improve the outcomes of cancer patients treated with immune checkpoint inhibitors.

Seres Therapeutics, Inc. (NASDAQ: MCRB) today announced that new preclinical data supporting the development of microbiome therapeutics for immuno - oncology (leveraging gut microbiota to impact tumor immunotherapy) 1 will be presented today by Sceneay et al in the late breaking poster session at the 2018 American Association for Cancer Research Annual Meeting (AACR) in Chicago.

NIH recently awarded $ 8.2 million to four sequencing centers, to start building a framework and data resources for the Human Microbiome Project.

«By combining the crowd - funding model with the open - access data analysis model that we pioneered with the Earth Microbiome Project, we can finally give anyone with an interest in his or her microbiome an opportunity to participate,» said Knight, a Howard Hughes Medical Institute Early Career Microbiome Project, we can finally give anyone with an interest in his or her microbiome an opportunity to participate,» said Knight, a Howard Hughes Medical Institute Early Career microbiome an opportunity to participate,» said Knight, a Howard Hughes Medical Institute Early Career Scientist.