«These rich and large
phenome data remain, however, largely unexploited, as they are difficult to access and the tools to analyze them require advanced skills,» says Johan Auwerx, whose lab at EPFL led the study with colleagues from Germany, Netherlands, and the US, as well as EPFL professors Kristina Schoonjans and Stephan Morgenthaler.
Not exact matches
By now, the BXD community has gathered around 300 million phenotype
data points from these animals, generating by far the largest coherent «
phenome» (a set of all phenotypes expressed in an organism) for any animal experimental cohort.
The RD - Connect Genome -
Phenome Analysis Platform, developed and hosted at the CNAG - CRG, securely integrates - omics
data with clinical information, providing not only a centralized
data repository but also a sophisticated and user - friendly online analysis system.
The project will also benefit from the RD - Connect Genome -
Phenome Analysis Platform developed at CNAG - CRG; in this case, it will be used to collate existing and newly generated genomic and phenotypic
data.
The
data stored on the Genome -
Phenome Analysis Platform can be accessed only by the authorised scientists and clinicians who underwent the registration and verification process.
The CNAG - CRG hosts the RD - Connect Genome -
Phenome Analysis Platform (https://platform.rd-connect.eu), which will be used in SOLVE - RD to collate existing and newly generated genomic and phenotypic
data.
All short - read sequencing
data have been deposited at the European Genome -
phenome Archive (EGA, http://www.ebi.ac.uk/ega/), which is hosted by the EBI, under accession number EGAS00001000274.