MacIver et al. used
phylogenetic approaches to document considerable expansions in eye size that occurred well before land colonization.
Using
a phylogenetic approach, authors Vanessa Garcia and Stéphane Aris - Brosou examined the evolutionary history of antiviral drug resistance.
Cross-checks with other, known language relationships prove that
the phylogenetic approach works - somewhat to Forster's amazement: «When you think about it, there is no reason for languages to be passed down in the same manner as a DNA molecule, and yet they are,» he says.
Not exact matches
The method, called computational Bayesian
phylogenetics, forces researchers to explicitly quantify the uncertainty in the models, says linguist Claire Bowern of Yale University, a pioneer of the
approach and co-author of the new study.
Langer calls that
approach to
phylogenetic analyses «old - fashioned.»
Phylogenetic trees add an extra dimension to our endeavours which is why this
approach is so special.
Although that
approach has been successfully used to decipher relations between organisms, calibrating it to measure the time elapsed since the divergence of
phylogenetic branches is problematic; concerning the early evolution of life, there is no generally accepted
approach.
We also developed a statistical binning
approach that improves multispecies coalescent analyses for handling gene trees with low
phylogenetic signal to infer a species tree (SM5)(58).
I think it also helped that a few of us from the same lab presented our research, which really illustrated multiple
approaches for understanding diversity through the lens of
phylogenetics.»
A possible way to overcome this problem is to adopt model based
approaches similar to those used in
phylogenetic analyses.
Using this
approach, we performed a systematic
phylogenetic and protein domain architecture - based study, encompassing the entire proteomes of all human Herpesviridae, as well as of select non-human herpesviruses, to define Strict Ortholog Groups (SOGs).
We therefore used several
approaches and different nuclear markers to infer the
phylogenetic relationships and to estimate the amount of gene flow between ancient and modern horses.
Current
approaches often use static representations of
phylogenetic, epidemiological, statistical and evolutionary analysis results that are difficult to relate to one another.
Carnegie researchers are developing new scientific
approaches that integrate
phylogenetic, chemical and spectral remote sensing perspectives - called Spectranomics - to map canopy function and biological diversity throughout tropical forests of the world.