Sentences with phrase «phylogenetic tree for»

Schematic representation of the phylogenetic tree for class A β - lactamases11.

Not exact matches

The task, for example, of grafting the history of salvation onto to the phylogenetic tree of human evolution does not belong to the teaching office of the Church.

In fact, their taxonomic analysis displaces it from its alleged perch on the phylogenetic tree: «The Haarlem specimen is not a member of the Archaeopteryx clade,» says Rauhut, a paleontologist in the Department of Earth and Environmental Sciences at LMU who is also affiliated with the Bavarian State Collections for Paleontology and Geology in Munich.

Bowern counters that the phylogenetic methods are actually ideal for investigating borrowing, because you can test models with different rates of borrowing and see how well the resulting trees match known facts.

Focusing on specific genes or regions is an especially good strategy for taxonomy projects, where variation in a few genes is often sufficient to place an organism on a phylogenetic tree.

To figure out which species within that complex are causing problems for the turtle eggs, the researchers had to build a fungal phylogenetic tree based on DNA.

These bursts were found in phylogenetic trees created for 22 microbial communities, chosen to represent a breadth of habitat types: plant, marine, and human gut and skin.

The absence of a single gene tree identical to the avian species tree is consistent with studies in yeast (82), indicating that phylogenetic studies based on one or several genes, especially for rapid radiations, will probably be insufficient.

Novel information theory - based measures for quantifying incongruence among phylogenetic trees

We also developed a statistical binning approach that improves multispecies coalescent analyses for handling gene trees with low phylogenetic signal to infer a species tree (SM5)(58).

Account for phylogenetic relatedness by creating a «family tree» that shows the linkages among various plants.

«Jellyfish are perfect candidates for this kind of research while holding a key position at the phylogenetic base of the metazoan tree,» says first author Katharina Bading, former Master student at GEOMAR and now PhD student at NTNU, Norway.

A German scientist has barred researchers in «immigration - friendly» countries from using Treefinder, a software program he invented for building phylogenetic — or evolutionary — trees.

The TMRCAs of major phylogenetic clades observed in the whole - exome tree represent upper boundaries for population split times.

Phylogenetic inference was carried out for each supermatrix using Exascale Maximum Likelihood (ExaML) v1.0.2 (sco.h-its.org/exelixis/software.html) under the «GAMMA» model of nucleotide substitutions and the starting trees generated above.

«Previously, phylogenetic trees were constructed from standard sets of genes and were used to identify the relationships of species,» said Gloria Coruzzi, a professor in New York University's Center for Genomics and Systems Biology and the principal investigator of the NSF grant.

Anyone can download the source - code from GitHub, run genetic - sequencing data for the outbreak they are following through the pipeline and build a web page showing a phylogenetic tree, or genetic history, of the outbreak.