The researchers said their finding could lead to new treatments that might help ease symptoms of menopause, but more research is needed to understand how other
rare gene variants could affect hot flashes.
While a few
rare gene variants can explain a fraction of ASD cases, Fallin and other researchers suspected that the epigenome could add significantly more to understanding this disease.
In the National Institutes of Health - funded study, researchers at Wake Forest Baptist identified and evaluated six
rare gene variants within the beta2 - adrenergic receptor gene, the gene that may influence the response to beta agonist drugs.
«We hypothesized that
rare gene variants would account for uncommon and severe adverse responses to long - acting beta agonists.
Fast population growth has littered our genomes with five times as many
rare gene variants as would be expected.
A rare gene variant discovered by UCL (University College London) scientists is associated with an increased risk of developing schizophrenia, bipolar disorder and alcoholism, confirms new research.
Not exact matches
This team also discovered 3,200
genes that had fewer loss - of - function or missense mutations than would be expected suggesting that these are likely disease - causing
variants that are
rare or absent in the population because of their detrimental effect on human health.
All four teams focused their hunts on
gene variations found in at least 10 per cent of the population, while Stefánsson thinks that
rarer variants may play a more significant role in menarche.
«
Rare variants alter
gene function but occur at low frequency in a population.
About 4 percent of people in the study carried one of these two
rare variants, which are located in the vicinity of the MGST1
gene on chromosome 12.
The CREBRF
variant appears to be
rare in other populations, but studying how the
gene works may help researchers better understand obesity.
The inherited component of breast cancer risk is due to a combination of
rare variants in
genes such as BRCA1 and BRCA2 that confer a high risk of the disease, and many commoner genetic
variants that each confer only a small risk.
By characterising the DNA sequence of these individuals, the project gained insight into the contribution of
rare variants to a broad range of disease scenarios, and discovered new genetic
variants and
genes underpinning disease risk.
The study, which has identified more than 200
rare variants inherited by children, determines that
genes YWHAZ and DRP2, among others, are new candidates in the research on autism genetic basis.
A study of people from an isolated village in the Netherlands reveals a link between
rare variants in the
gene NKPD1 and depressive symptoms.
The NCP1
gene identified is not a known
variant in humans; it is a
rare mutation to the feline population.
Comparing the two sets of
genes, the team discovered several immune - related
gene variants that were
rare among the living.
A schizophrenic from Brazil might have a combination of
rare -
variant genes contributing to the disease that is different from the mix in a schizophrenic from Norway.
The existence of so many
rare variants complicates efforts to study the relationship between
genes and health.
A naturally occurring
variant in a different
gene, the so - called APOE2 allele, has been previously shown to protect against Alzheimer's disease, but Stefansson says the new
variant, while
rarer, confers much greater protection.
Other medical sequencing projects will use DNA sequencing to: discover new
genes that are involved in common diseases; identify the
genes responsible for dozens of relatively
rare, single -
gene (autosomal Mendelian) diseases; sequence all of the
genes on the X chromosome from affected individuals to identify those involved in sex - linked diseases; and survey the range of
variants in
genes known to contribute to certain common diseases.
Whole - exome sequencing of 238 African American subjects identified 6
rare missense
variants within the EOAD
genes, which were observed in AD cases but never among controls.
Abstract: We conducted a comprehensive screening of
rare coding
variants in an African American cohort to identify novel pathogenic mutations within the early - onset Alzheimer's disease (EOAD)
genes (APP, PSEN1, and PSEN2) in this understudied population.
''
Rare de novo
variants associated with autism implicate a large functional network of
genes involved in formation and function of synapses» will be published June 9 in Neuron.
An abundance of
rare functional
variants in 202 drug target
genes sequenced in 14,002 people.
We conducted a comprehensive screening of
rare coding
variants in an African American cohort to identify novel pathogenic mutations within the early - onset Alzheimer's disease (EOAD)
genes (APP, PSEN1, and PSEN2) in this understudied population.
Deeper analyses, revealed that the RNA expression pattern of a
rare variant of the NCAN
gene was highly correlated with that of the previously suggested susceptibility
genes for developmental dyslexia.
April 17, 2013
Gene study helps understand pulmonary fibrosis A new study looking at the genomes of more than 1,500 patients with idiopathic pulmonary fibrosis, a rare and devastating lung disease, found multiple genetic associations with the disease, including one gene variant that was linked to an increase in the risk of de
Gene study helps understand pulmonary fibrosis A new study looking at the genomes of more than 1,500 patients with idiopathic pulmonary fibrosis, a
rare and devastating lung disease, found multiple genetic associations with the disease, including one
gene variant that was linked to an increase in the risk of de
gene variant that was linked to an increase in the risk of death.
More recently, in a joint initiative with the BBMRI - LPC project (Biobanking and Biomolecular Resources Research Infrastructure — Large Prospective Cohorts) and the Wellcome Trust Sanger Institute, the CNAG - CRG launched a call to promote the use of sequencing technologies for the identification of novel causative
variants and
genes and to molecularly diagnose
rare disease patients.
A key step in the analysis of
rare variants in disease is to distinguish genetic
variants that are likely to disturb
gene function.
Here we utilize whole - genome sequencing of Roifman Syndrome patients to reveal compound heterozygous
rare variants that disrupt highly conserved positions of the RNU4ATAC small nuclear RNA
gene, a minor spliceosome component that is essential for minor intron splicing.
Four
genes also exhibited a significant burden of
rare damaging
variants, suggesting a functional link to disease risk.
They applied a strategy for seraching
genes with multiple
rare (minor allele frequency < 0.001)
variants in cases but not in controls with a potentially damaging effect.
One of the
rare variant burden
genes, TIMP3, was previously associated with Sorsby's fundus dystrophy, a
rare disease similar to AMD but with earlier on set and Mendelian inheritance.
This idea is intuitive: in theory, large - effect
variants would be kept at low frequency by natural selection, a pattern that's well established for mutations that cause
rare single -
gene disorders.
It is important to note whether a test interrogates a set of common
variants, or sequences entire
genes (and identifies both common and
rare variants).
Furthermore, three of four affected family members carried a
rare variant in the TSHZ3
gene, also associated with AβPP processing.
Many patients suffering from
Rare Disease harbour genomic
variants (sequence
variants or copy number
variants) that by disrupting normal
gene expression lead to disease.
The theory and approaches of aggregation testing are too broad a topic to cover here, but the general concept is this: by grouping individual
rare variants into a biological unit — most often, a
gene or exon — it's possible to test the super-genotype (i.e. «has a
rare variant in
gene A») for association.
We performed exome sequencing in 13 parent - offspring trios and 112 unrelated individuals with nonsyndromic AVSDs and identified five
rare missense
variants (two of which arose de novo) in the highly conserved
gene NR2F2.
The authors searched for high - quality
rare coding
variants in a curated set of 224 retinal disease
genes.
Styrkarsdottir U Severe osteoarthritis of the hand associates with common
variants within the ALDH1A2
gene and with
rare variants at 1p31.
We implemented a
rare variant transmission disequilibrium test (TDT) to search for autosomal recessive epileptic encephalopathy
genes in a cohort of 320 outbred patient - parent trios that were generally prescreened for
rare metabolic disorders.
High - resolution maps of enhancer - promoter interactions in
rare primary human T cell subsets and coronary artery smooth muscle cells link
variants associated with autoimmune and cardiovascular diseases to target
genes.
By performing a meta - analysis of
rare coding
variants in whole - exome sequences from 4,133 schizophrenia cases and 9,274 controls, de novo mutations in 1,077 family trios, and copy number
variants from 6,882 cases and 11,255 controls, we show that individuals with schizophrenia carry a significant burden of
rare, damaging
variants in 3,488
genes previously identified as having a near - complete depletion of loss - of - function
variants.
Friday, Oct. 20, 5:30 - 5:50 p.m., South Hall B, South Building Featured Plenary Abstract: The contribution of
rare variants, polygenic risk, and novel candidate
genes to the hereditary risk of breast cancer in a large cohort of breast cancer families N. Li, Peter MacCallum Cancer Center, et al
We detected a burden of very
rare, damaging missense
variants in known Crohn's disease risk
genes, suggesting that more comprehensive sequencing studies will continue to improve understanding of the biology of complex diseases.
159/6: 00 A
rare missense
variant in the B - type natriuretic peptide
gene NPPB is associated with increased risk for incident heart failure.
Conversely,
rare variants that inactivate the NOS3 or GUCY1A3
genes were associated with a 23 mm Hg higher systolic blood pressure (CI 12, 34 mm Hg; p = 5.6 * 10 -LRB--5)-RRB- and a three-fold higher risk of coronary heart disease (OR 3.03 CI 1.29, 7.12, p = 0.01).
309/5: 00 Meta - analysis of
rare and common exome chip
variants identifies and replicates S1PR4 and other novel
genes influencing blood cell traits.