In a new study, published in Current Biology this week, a research team from Uppsala University reports new insights into the regenerative capabilities of Stentor,
a single celled model organism for regeneration biology.
Apart from
these single cell models, Dijkstra also developed models including connections.
Not exact matches
The discovery, reported in June in
Cell, completely breaks with the standard model of facial recognition, which claims each face you recognize is represented by a single neuron (one cell firing when you see your grandmother, another when you see Jennifer Anist
Cell, completely breaks with the standard
model of facial recognition, which claims each face you recognize is represented by a
single neuron (one
cell firing when you see your grandmother, another when you see Jennifer Anist
cell firing when you see your grandmother, another when you see Jennifer Aniston).
Freedom Scientific's larger Focus displays include 40 - and 80 -
cell single - row
models, which cost about $ 3,900 and $ 7,800, respectively.
The NB activity in Alberta is far ranging, with such research as self - assembled nanostructures (M. J. Brett),
single -
cell cancer analysis (L. M. Pilarski), computational
modeling (D. Wishart), micro-total analysis systems or lab on a chip (D. J. Harrison),
cell identification and manipulation (K. Kaler), and microsystems and medical diagnostics (Backhouse).
«Transplanted hematopoietic stem
cells reverse damage caused by neuro - muscular disorder: In mouse
model of Friedreich's ataxia, a
single infusion measurably restored normal cellular functions.»
As costs come down and methods become more standardized, experts in the field expect
single -
cell sequencing to become the new
model for both transcriptomic and genomic studies.
Researchers at University of California San Diego School of Medicine report that a
single infusion of wildtype hematopoietic stem and progenitor
cells (HSPCs) into a mouse
model of Friedreich's ataxia (FA) measurably halted cellular damage caused by the degenerative disease.
The scientists, in collaboration with IBM, are launching the effort by building a computer
model of the neocortical column of a rat, a
single circuit of about 10,000
cells, each of which is capable of thousands of connections.
«We now have a
model that incorporates this seemingly contradictory data and points to a
single and simple process for condensed chromosome organization across all
cell types.
«Josh wanted someone to come in and build a
model of
single AII
cells to try and understand how the AII works as an input / output device,» Cembrowski explains.
With collaborators from India, Japan, and the United States, the inStem lab is exploring «biochemistry, biophysics, humanized mouse
models, and
single -
cell models.»
He cautions there is a huge gap between the simple response of
single -
celled animals and the cognitive abilities of developed species, but adds there is no doubt that a combined set of simple circuit
models will have more complex behaviour.
Tubo et al. used a
single -
cell adoptive transfer
model in mice to answer this question.
Tissue engineers have been unable to grow epidermis with the functional barrier needed for drug testing, and have been further limited in producing an in vitro (lab)
model for large - scale drug screening by the number of
cells that can be grown from a
single skin biopsy sample.
The bio-bots are
modeled after
single -
celled creatures with long tails called flagella — for example, sperm.
«To our knowledge, our
model is the first in which expression of a
single gene in postnatal hair
cells results in hair
cell survival and hearing preservation in mice that otherwise suffer from age - related and noise - induced hearing loss,» Dr. Chen said.
In the plant -
model Arabidopsis thaliana, the state of dormancy is maintained by the endosperm, a
single cell layer within the seed coat surrounding the embryo, which synthesizes and continuously releases ABA towards the embryo.
Their series of experiments showed that a
single application of concentrated, mature B
cells accelerated wound healing and improved the quality of tissue repair in both animal
models.
Next, the team used other mouse
models in which part of the lung was removed and
single cell culture to study the plasticity of
cell types during lung regrowth.
The team
modelled how the membrane changed, enabling LUCA's descendants to move to new, more challenging environments and evolve into two distinct types of
single -
celled organism, bacteria and archaea, creating the deepest branch of the tree of life.
«Even though we only demonstrated the technique with
model membranes and
single cells, this technique is translatable to biological tissue,» said Brasselet.
The study used whole - exome sequencing to characterize genetic alterations that occur at the
single nucleotide level for all genes in 25
cell lines commonly used as
models of bladder cancer.
Dijkstra looked into this mechanism in detail, using mathematical
models describing the biophysics of a
single cell.
This visual abstract depicts how Wei et al. utilize
single -
cell phosphoproteomic analysis of patient derived glioblastoma
models to identify shifts in signaling coordination following short - term treatment with kinase inhibitors, which facilitates the design of combination therapy approaches with reduced resistance and improved efficacy.
Engram
cell in AD mouse — This image depicts a
single memory engram
cell (green) in the hippocampal dentate gyrus (DG) region of a mouse
model of early Alzheimer's disease.
In the humanized mouse
model under the conditions studied here, partial loss of cxcr4 in human T
cells due to treatment with X4 - ZFNs provided selective pressure for either the evolution or emergence of a pre-existing
single amino acid mutation in the V3 loop of the infecting X4 HIV - 1 strain that enabled it to use CCR5 as efficiently as CXCR4.
The scientists used diffusion maps — a basic way to order snapshots of
single cells along their developmental journey — but they plan to study developmental trajectories using a new algorithm called Wishbone, which uses
single -
cell RNA sequencing and mass cytometry data to specifically
model branching steps during
cell differentiation (Nat Biotechnol, 34:637 - 45, 2016).
3D
modeling of chromatin structure: is there a way to integrate and reconcile
single cell and population experimental data?
Bethesda, USA (2016 - present) Research areas: Super-resolution microscopy,
single - molecule imaging, gene expression, computational
modeling and data analysis This section includes all projects during my postdoctoral research stay at the National Institutes of Health in Bethesda, MD (Unites States): (9) Understanding gene expression in eukaryotic
cells»
Single -
cell technologies will be applied to experimental
model systems such as organoids, miniature organs grown in the petri dish from one or more
cells.
Further research topics are statistical / computational methods to study complex experimental data (e.g. cellular genealogies) and image analysis procedures (e.g.
model - based segmentation algorithms in the context of automatic
single cell tracking).
Hematopoiesis, where a
single hematopoietic stem
cell gives rise to the entire blood system, is an important
model for differentiation with great medical importance.
«We found several distinctions between sensitive and resistant
models detected at the
single -
cell level, which testified to
single -
cell sequencing potential usefulness for understanding how these cancers may develop resistance.»
The goal of this work is to characterize the role of dendrites in learning and memory processes so as to formulate a unifying theory regarding their contribution in memory formation across brain regions and abstraction levels.This will be achieved via the development of computational
models that start at the
single cell level and expand to the microcircuit and the network level, while varying in their degree of biophysical detail.
Towards this goal, we build abstract mathematical as well as detailed biophysical
models of neural
cells and circuits across multiple brain regions (hippocampus, amygdala, PFC) and abstraction levels (
single neurons, microcircuits, neuronal networks).
We focus on squamous tissues, the skin epidermis and the lining of the oesophagus, using transgenic
models, novel sequencing approaches, live imaging and
single cell analysis to uncover key steps in cancer development, with aim of developing rational interventions to decrease cancer risk.
These epithelial organoid cultures are genetically and phenotypically extremely stable, allowing transplantation of the cultured offspring of a
single stem
cell, as well as disease
modeling by growing organoids directly from diseased patient tissues (45).
For a systems - level understanding of all crucial protein interactions during
cell division, we are combining automated
single molecule calibrated imaging and computational data analysis with advanced machine learning and
modelling approaches to build an integrated protein atlas of the human dividing
cell.
Using the oral microbial community as a
model system, we are applying functional genomic approaches including Stable Isotope Probing (SIP), metatrascriptomics and directed
single cell genomic approaches to enable us to overcome this limitation.
Based on the architecture of the root, the
model considered
cells within a
single file in these two zones (Fig 1A and B).
Cancer
cells in intravital mouse
models and in vitro display many «modes» of migration, from
single isolated
cells with round or elongated phenotypes to loosely - / non-adherent «streams» of
cells or collective migration of
cell strands and sheets.
In the
model of herpes simplex virus (HSV)-1 infection of B6 mice, > 90 % of the responding CD8 + T
cells use Vbeta10 or Vbeta8 and are directed against a
single glycoprotein B (gB498 - 505) epitope, gB - 8p.
The NIH has for years supported research in which human
cells are transplanted into animal
models, and it continues to fund human / nonhuman chimera research that lies outside the scope of research
singled out in its notice of moratorium.»
In our lab we use a combination of quantitative
single cell experiments and computer / in silico
models to better understand miRNA regulation.
333/12: 00 Identifying critical
cell types in complex traits from purified and
single -
cell expression using a polygenic
model.
By developing computational
models that are constrained by experimental evidence (neuroimaging,
single -
cell recording, anatomical, lesion studies), we can generate hypothesis about how brain networks orchestrate behavior.
By using
single -
cell transcriptomics and computational analysis using a temporal mixtures of Gaussian processes
model, termed GPfates, we reconstructed the developmental trajectories of Th1 and Tfh
cells during blood - stage
Plasmodium infection in mice.
We here describe f - scLVM (factorial
single -
cell latent variable
model), a method based on factor analysis that uses pathway annotations to guide the inference of interpretable factors underpinning the heterogeneity.
First, demonstration of the possibility of
modeling different diseases affecting adult
cells using a
single platform has answered one of the most pressing questions in the human iPS
cell — disease
modeling field.