This essentially gives us «barcodes» of
specific gene loci, which we can use to help untangle the complex genetics of complex diseases,» said Andrey Rzhetsky, PhD, professor of genetic medicine and human genetics at the University of Chicago, who led the study.
Not exact matches
The so - called SERPINB
gene cluster on chromosome 18 was identified as a
specific genetic risk
locus for food allergies.
In their study, the researchers showed that already at the age of six weeks in the mice with a rapid weight gain, the DPP4
gene was less methylated at four
specific loci, i.e. epigenetically altered, compared to the other mice.
The genomics era has had a profound impact on life science research, leading to significant developments such as the use of expression quantitative trait
loci (eQTLs), which link polymorphisms in single
genes to quantifiable changes in
gene expression associated with
specific diseases.
These regions can be clumped into larger areas of the genome called quantitative trait
loci, which are known to contain
genes that produce a
specific physical effect, such as shaggy hair.
To demonstrate the critical role for ecRNA - directed methylation, first author Katherine Savell, a graduate student in the Day lab, blocked one
specific ecRNA for the Fos
gene locus in the hippocampus of the rat brain.
The
locus sits close to an area of the genome where humans and chimps are known to share
specific combinations of
genes.
Despite evidence for divergence at several
loci, certain 1a characteristics were preserved including the length of the alternative reading frame / F protein (ARF / F)
gene, and a subtype 1a -
specific phosphorylation site in NS5A (S349).
«It's hard to fit every single
locus in the genome into one
specific model of
gene regulation.
Bivalent marking of
loci encoding lineage
specific transcription factors in ES cells is thought to prepare these
genes for rapid activation of transcription once the pluripotency network is extinguished [4].
It is important to distinguish lineage
specific gene expression shown here, which occurs at a high level and with a degree of specificity in the different population compartments, to the low level of genome wide transcription observed in ES cells by others [22], or with transcript initiation at many
loci noted previously in ES cells [23].
Saturday, Oct. 21, 11:20 - 11:40 a.m., South Hall B, South Building Featured Plenary Abstract: Massively parallel reporter assays combined with cell - type
specific expression quantitative trait
loci profiling identified a functional melanoma risk variant in HIV - 1 inhibitor
gene, MX2 J. Choi, National Cancer Institute, et al
With the premise that accumulation of putative resistance - conferring SNPs, potentially in combination with
specific resistance
genes, precedes full resistance, we retrogressively surveyed the hotspot
loci and quantified the number of SNPs and / or
genes, which if accumulated would confer full resistance to an otherwise susceptible strain.
The most basic genetic scenario is where a
gene on a
specific locus determines each trait.
Genes have pairs of alleles (one from each parent) that are located at
specific sites (
loci) on a chromosome.