Sentences with phrase «transcriptome sequencing»

Whole genome and whole transcriptome sequencing of 31 pediatric Asian patients with T - cell acute lymphoblastic leukemia found that about 10 percent had the same alteration in a non-coding region of DNA.

To annotate the genome, the team generated transcriptome sequence data — which can be used to measure gene expression based on RNA levels — in 12 different tissues types.

Split Pool Ligation - based Transcriptome sequencing (SPLiT - seq) is a scalable technique for characterizing RNA in individual cells that can be used to identify the various cell types found in the brain and other tissues.

For 18 species in the PLAZA data set, as well as A. trichopoda, P. sitchensis, P. abies, and translated P. taeda transcriptome sequences, we further break down the protein - to - genome alignments that passed the initial cutoff into three categories: ESS ≥ 90, 90 < ESS ≤ 80 and 70 ≤ ESS < 80 (Figure 1).

With the X Ten and other instruments, we can provide custom - targeted, exome, whole genome, and / or transcriptome sequencing for humans and model organisms.

Transcriptome sequencing during mouse brain development identifies long non-coding RNAs functionally involved in neurogenic commitment.

Tumor samples from two WGS cases also underwent transcriptome sequencing (RNA - seq).

Du X, Li L, Zhang S, Meng F, Zhang G. SNP Identification by Transcriptome Sequencing and Candidate Gene - Based Association Analysis for Heat Tolerance in the Bay Scallop Argopecten irradians.

In this study the authors analyzed 6,959 coding mutations that had genome and transcriptome sequencing coverage.

We carried out genome and transcriptome sequencing of E. invadens to identify molecular processes involved in stage conversion.

Our lab has a strong track record in integration of large - scale genome and transcriptome sequencing data sets to characterize the genetic architecture of variants that affect the transcriptome.

The Ion Proton ™ System is the first benchtop non-imaging semiconductor sequencing system capable of human - targeted genome, exome, or transcriptome sequencing in a few hours — with DNA - to - variants called in a single day.

Previous studies have published bay scallop expressed sequence tags [23, 24] and transcriptome sequences [17], which provided valuable resources for gene cloning.

Draft genome assembly (high coverage) and transcriptome sequencing of 14 FBT genomes that infect various body sites

Draft genome assembly and transcriptome sequencing of five Glossina genomes and two comparative genomes; low coverage genome sequencing of ~ 12 field populations.

Transcriptome sequencing and development of an expression microarray platform for the domestic ferret.

We are also interested in leveraging on transcriptome sequencing to improve the interpretation of the personal genome.

In this study we have integrated genome and transcriptome sequencing data to understand the landscape of functional variation in human populations.

Transcriptome sequencing is incredibly valuable for cancer genomics, because it offers insights into the immediate molecular effects of somatic mutations.

By leveraging the exponential improvements in the semiconductor industry (known as Moore's Law), the Ion Proton ™ Sequencing System provides an unprecedented level of scalability and flexibility to support a broad range of high throughput sequencing applications, ranging from human - scale genome to exome to transcriptome sequencing.

This is a landmark study not only due to the size, but the systematic characterization of each case using whole - genome sequencing (WGS), exome sequencing (WES), and transcriptome sequencing (RNA - seq).

Integrated genome and transcriptome sequencing of the same cell.

Ryan Morin, a graduate student in the Marra lab, walked us through a summary of transcriptome sequencing and how it can be used not only for gene expression, but also discovery of mutations and characterization of alternate splicing.

Transcriptome sequencing and whole genome expression profiling of chrysanthemum under dehydration stress