We're looking for a postdoc to work on computational analysis of disease - associated and other functional
variation in human genomes!
Results: The study revealed three novel
variations in the human genome that increase risk of Fuchs dystrophy.
This is also the first study to attempt to correlate performance on this test with
variation in the human genome.
This approach has successfully pinpointed millions of small
variations in the human genome.
Professor Dermitzakis» research focuses on the genetic basis of regulatory variation and gene expression
variation in the human genome, the processes that govern non-coding DNA evolution.
Simultaneous inference of selection and population growth from patterns of
variation in the human genome.
The paper itself is very statistical in nature, with various «selection models» applied to determine the demographic and selective effects on amino acid
variation in the human genome.
If this is true, then there are important implications for genetic association studies, which often rely on surveys of common genetic
variation in the human genome.
Here we report a public database of common
variation in the human genome: more than one million single nucleotide polymorphisms (SNPs) for which accurate and complete genotypes have been obtained in 269 DNA samples from four populations, including ten 500 - kilobase regions in which essentially all information about common DNA variation has been extracted.
Reykjavik, ICELAND, December 8, 2008 — deCODE genetics (Nasdaq: DCGN) today announced the discovery by an international consortium of scientists from deCODE and major European and US academic institutions of a single letter
variation in the human genome (SNP) that is associated with increased fasting glucose levels and risk of type 2 diabetes (T2D).
Taken together, these studies both highlight a fact that I find myself repeating many times: a significant fraction of functional
variation in the human genome lies outside the exons of known protein - coding genes.
Reykjavik, ICELAND, December 8, 2008 — deCODE genetics (Nasdaq: DCGN) today announced the discovery by an international consortium of scientists from deCODE and major European and US academic institutions of a single letter
variation in the human genome (SNP) that is...
Scientists at deCODE genetics and colleagues in Iceland and Holland today report the discovery of
variations in the human genome that influence pigmentation of hair, eyes and skin.
New risk variants published today will also be folded into deCODEme ™ Reykjavik, ICELAND, February 10, 2008 - deCODE genetics (Nasdaq: DCGN) today announced the launch of deCODE PrCa ™, a reference laboratory test for common, single - letter
variations in the human genome...
His research group provided the first genome - wide view of segmental duplications within human and other primate genomes and he is a leader in an effort to identify and sequence normal and disease - causing structural
variation in the human genome.
Dr. Talkowski has performed seminal studies to introduce high - resolution genomics techniques to delineate the types of genetic variation that were classically defined using cytogenetic methods, which has discovered new classes of complex genomic
variation in the human genome that are remarkably common yet otherwise cryptic to conventional technologies.
Examples include the study of allelic
variation in the human genome and the development of computational methods for the discovery of cancer - associated genes and diagnostic cancer markers using genomic profiles derived from different tumor types.
His research interests focus on the structural
variations in the human genomes, medical genetics and genomics, pathogenesis of human diseases, molecular diagnosis and precision medicine.
Reykjavik, ICELAND, January 19, 2009 — Scientists at deCODE genetics (Nasdaq: DCGN) and colleagues from the US and ten European countries today announced a long - awaited first in cancer research: the discovery of common single - letter
variations in the human genome (SNPs) linked to susceptibility not of one, but several different types of cancer, including those of lung, bladder, prostate, skin and cervix.
Smith, N.G., Webster, M.T. & Ellegren, H. Deterministic mutation rate
variation in the human genome.
Not exact matches
Given Britain's involvement
in an international research consortium formed to create the most detailed and medically useful picture of
human genetic
variation to date, tonight's other discussion points include the scientific value of the information and the regulatory implications of providing public access to personal
genome data through academic research projects, as well as through commercial organisations.
The 1000
Genomes Project, a private - public consortium established
in 2008, aims to create a detailed map of
human genetic
variation.
When Pääbo's team looked at patterns of nuclear
genome variation in present - day
humans, it identified 12
genome regions where non-Africans exhibited variants that were not seen
in Africans and that were thus candidates for being derived from the Neandertals, who lived not
in Africa but Eurasia.
Professor Dominic Kwiatkowski, one of the lead authors of the paper, from the Wellcome Trust Sanger Institute and the Wellcome Trust Centre for
Human Genetics, said: «We can now say, unequivocally, that genetic variations in this region of the human genome provide strong protection against severe malaria in real - world settings, making a difference to whether a child lives or
Human Genetics, said: «We can now say, unequivocally, that genetic
variations in this region of the
human genome provide strong protection against severe malaria in real - world settings, making a difference to whether a child lives or
human genome provide strong protection against severe malaria
in real - world settings, making a difference to whether a child lives or dies.
They also compared the
human genomes with recently sequenced
genomes of Neanderthals and Denisovans and found similar genetic
variation, which indicates that the facial
variation in modern
humans must have originated prior to the split between these different lineages.
Published September 15
in Genome Biology, the study relied on new software for researchers that identifies connections between seemingly unrelated
human diseases and traits through the tiny, risk - conferring genetic
variations they have
in common.
With the completion of the first phase of the
Human Genome Project
in 2000, and the advent of sequencing technologies that can detect gene
variations such as single nucleotide polymorphisms (SNPs), for the first time scientists have the tools
in hand to find the key immune genes and genetic networks that play roles
in vaccine response.
Location, location, location
Human variation depends on a collection of random mutations across the
genome, contributing to differences
in appearance as well as behavior.
They have made possible wholesale scans that turn up new gene modifications and
variations, and the same should prove true for the new
human gene arrays, says Joseph Ecker, a plant scientist at the Salk Institute for Biological Studies
in La Jolla, California, who has helped pioneer whole -
genome chips for Arabidopsis.
«NGS technologies have vastly improved our understanding of the
human genome and its
variation in diseases such as cancer,» said Ken Chen, Ph.D., assistant professor of Bioinformatics and Computational Biology and co-author of the Nature Methods article.
Since scientists first decoded a draft of the
human genome more than 15 years ago, many questions have lingered, two of which have been addressed
in a major new study co-led by a Princeton University computer scientist: Is it possible, despite the complexity of billions of bits of genetic information and their
variations between people, to develop a mechanistic model for how healthy bodies function?
To reduce false positives when identifying genetic
variations associated with
human disease through genome - wide association studies (GWAS), Dartmouth researchers have identified nine traits that are not dependent on P values to predict single nucleotide polymorphisms (SNP) reproducibility as reported in Human Genetics on October 2,
human disease through
genome - wide association studies (GWAS), Dartmouth researchers have identified nine traits that are not dependent on P values to predict single nucleotide polymorphisms (SNP) reproducibility as reported
in Human Genetics on October 2,
Human Genetics on October 2, 2014.
The 1000
Genomes Project, established
in 2008, is an international research effort to establish the most detailed catalog of
human genetic
variation.
SNPs are
variations in only one DNA base that can serve as physical landmarks along the 3 billion base pairs of the
human genome.
Through his role
in the UM Center for
Genome Technology, part of the Miller School of Medicine, Dr. Hedges is actively involved
in the incorporation of novel genomic technologies into the process of searching for the genetic
variation underlying
human disease risk.
India has been underrepresented
in genome - wide surveys of
human variation.
Researchers are exploring the use of new technologies for uncovering genetic
variations in humans and for closing gaps
in the mapping of the
human genome.
The team selected possible leads from the intersection of more than 20,000 p53 binding sites
in the
human genome, 10 million inherited genetic
variations genotyped
in the 1000
Genomes Project, and 62,000 genetic
variations associated with
human cancers identified
in genome - wide association studies (GWAS).
The study for the first time estimates the minimum number of locations
in the
human genome — 250 to 300 — where gene copy number
variation (CNV) can give rise to autism spectrum disorder (ASD).
In 2009, he established the Center for
Human Disease Modeling at Duke University, which aims to facilitate collaboration across disciplines and to develop physiologically relevant, scalable tools to study variation among human patient gen
Human Disease Modeling at Duke University, which aims to facilitate collaboration across disciplines and to develop physiologically relevant, scalable tools to study
variation among
human patient gen
human patient
genomes.
Djimdé leads a research group at the University of Science, Techniques and Technologies of Bamako that is working to understand how
genome variation in the Plasmodium falciparum parasite, its
human host, and the Anopeheles gambaie mosquito vector contribute to the mechanisms of malaria disease spread.
Citation: Buckley RM, Kortschak RD, Adelson DL (2018) Divergent
genome evolution caused by regional
variation in DNA gain and loss between
human and mouse.
The deCODE BreastCancer ™ test measures seven widely replicated single - letter
variations (SNPs)
in the
human genome that deCODE and others have linked to risk of breast cancer.
I was working
in a community of people who were all thinking about looking at genetic
variations, of how you might look at them and how you might understand them, and so reading lots of papers from other folks who were doing great work
in that area I just looked at ways that you could basically go across the
human genome and look at every
variation, everything that's variable between
human populations.
The Kwiatkowski group investigates Plasmodium, Anopheles and
human genome variation in large clinical and epidemiological studies carried out with partners
in over 20 malaria - endemic countries.
Montgomery, S.B., Lappalainen, T., Gutierrez - Arcelus, M. & Dermitzakis, E.T. Rare and common regulatory
variation in population - scale sequenced
human genomes.
Projects within the Swedish
Genomes Program will aim at identifying the genetic causes of
human diseases of high health relevance and at the establishment of a reference database of genetic
variation in the Swedish population.
Abstract title: «The biological and clinical impact of mitochondrial
genome variation in human embryos» by E Fragouli et al. presented at the 2015 American Society for Reproductive Medicine conference.
The challenge for the years to come is to convert data on new genes, gene defects and
human genome variation in patients with genetic cardiovascular disease into functionally relevant information on the diverse pathophysiological mechanisms and clinical manifestations.
These projects explore the consequences of
genome variation on
human cell biology, and thus gene function
in health and disease.