Her current role focuses on advancing the use of
whole genome sequencing in clinical care by providing access and education to healthy individuals through the... Understand Your Genome programs, MyGenome visualization software, and other research initiatives.
Complex Structural Variants Resolved by Short - Read and Long - Read
Whole Genome Sequencing in Mendelian Disorders
Professor George Patrinos (University of Patras, Greece) gave an update on the use of
whole genome sequencing in pharmacogenomics, which followed by several company lectures that supported the event as sponsors.
350/12: 15 Leveraging
whole genome sequencing in an internal study - specific imputation reference panel for family - based designs.
The report recommends that NHSE should perform a detailed evaluation of the project «to inform an assessment of the anticipated clinical - and cost - effectiveness of routine
whole genome sequencing in the NHS», but also notes that research and evidence gathering will need to be ongoing processes.
He recently published the first randomized trial to assess appropriateness of care and downstream medical costs of
whole genome sequencing in primary care.
The Government should formally evaluate the 100,000 Genomes Project to inform the wider introduction of
whole genome sequencing in the NHS.
Meanwhile, the report proposes that decisions on when to provide
whole genome sequencing in place of conventional alternative diagnostic tests «should take into account the digital infrastructure available».
It also discusses the various new trends in the pharmacogenomics field, such as pharmacometabolomics - aided pharmacogenomics and the application of
whole genome sequencing in pharmacogenomics.
Chowdhury tells The Scientist that his group at Rady Children's, which has performed rWGS on about 150 infants, is «in talks with multiple children's hospitals» around the U.S. in the hopes that many more children in NICUs will have
their whole genomes sequenced in the near future.
Not exact matches
Veritas Genetics acquires Curoverse — Veritas Genetics, a leader
in whole -
genome sequencing, has acquired computing and bio-informatics firm Curoverse for an undisclosed amount.
In the absence of a lucrative market, the X Prize's contest will give companies doing
whole -
genome sequencing a boost.
Whole -
genome sequencing identifies inherited noncoding variants
in families affected by autism spectrum disorder.
In new research, published in the journal FEBS Letters, scientists at the Quadram Institute carried out a search of the National Centre for Biotechnology Information's Whole Genome Sequence databas
In new research, published
in the journal FEBS Letters, scientists at the Quadram Institute carried out a search of the National Centre for Biotechnology Information's Whole Genome Sequence databas
in the journal FEBS Letters, scientists at the Quadram Institute carried out a search of the National Centre for Biotechnology Information's
Whole Genome Sequence database.
In 2014, biologists published an avian tree based on the
sequences of
whole genomes of about 40 species.
Now that the
whole Neanderthal
genome has been
sequenced, Harvard geneticist George Church thinks a clone could be gestated
in a human surrogate mother.
«These predictive algorithms seem to do a good job when CRISPR is performed
in cells or tissues
in a dish, but
whole genome sequencing has not been employed to look for all off - target effects
in living animals,» says co-author Alexander Bassuk, MD, PhD, professor of pediatrics at the University of Iowa.
To address this gap
in knowledge, Mirabello and Schiffman teamed up with co-senior author Robert Burk of Albert Einstein College of Medicine to
sequence the
whole genomes of 5,570 HPV16 - infected cell and tissue samples from women around the world and to identify associations between HPV16 genetic variants and the risk of cervical precancer and cancer.
Using advanced
sequencing technologies, University of Oklahoma anthropologists demonstrate that human DNA can be significantly enriched from dental calculus (calcified dental plaque) enabling the reconstruction of
whole mitochondrial
genomes for maternal ancestry analysis — an alternative to skeletal remains
in ancient DNA investigations of human ancestry.
Whole -
genome sequencing is the combination: everything
in detail.
They
sequenced the first
whole animal, the flatworm,
in 1998, and then pushed the systems to handle big chunks of bigger
genomes — billions of base pairs.
In January, the 99 Lives Cat
Whole Genome Sequencing Initiative began collecting DNA samples from cats worldwide.
Whole -
genome sequencing was used to study the differences
in some of the major ethnolinguistic groups
in the country.
In a recent endometrial cancer study you led, whole genome sequencing turned up mutations that had never been seen in that diseas
In a recent endometrial cancer study you led,
whole genome sequencing turned up mutations that had never been seen
in that diseas
in that disease.
«Studies like the current one involving rhabdomyosarcoma are giving us a close - up look at the way cancer evolves
in response to treatment,» said study co-author Richard K. Wilson, Ph.D., director of The
Genome Institute at Washington University School of Medicine in St. Louis, where scientists have extensive expertise analyzing tumor recurrence using whole - genome seque
Genome Institute at Washington University School of Medicine
in St. Louis, where scientists have extensive expertise analyzing tumor recurrence using
whole -
genome seque
genome sequencing.
In the paper, the scientists show that combining the drug - resistance profile of a bacteria with its
whole -
genome DNA
sequence allowed them to build up a series of drug - resistance «DNA photofits» for resistance to specific drugs.
While the first
whole genome sequence was completed
in 2001 at a cost of $ 500 million, by 2014, we may finally see the $ 999
genome.
Using
whole genome sequencing technology, researchers from The Netherlands have now succeeded
in determining that at least 6.5 % of de novo mutations occur during the development of the child (post-zygotic) rather than from the germline of a parent.
The team integrated three, complementary gene
sequencing approaches to look for mutations
in tumor cells from SS patients:
whole -
genome sequencing in six subjects,
sequencing of all protein - coding regions (exomes)
in 66 subjects, and comparing variation
in the number of copies of all genes across the
genome in 80 subjects.
With more work, the technique could be used to
sequence millions of longer DNA strands
in parallel, slashing the cost of
sequencing a
whole mammalian
genome.
To confirm and strengthen the findings, Zwick and his team are currently performing an independent study of individuals with Down syndrome, using
whole genome sequencing to further delineate alterations
in genes that perturb heart development
in children.
They digested human genomic DNA using Cas9 nucleases
in a test tube, which was then subjected by
whole genome sequencing.
In natural, unaltered organisms, she explains, each sequence of DNA in a genome codes for a particular outcome, expressed as a protein that determines a quality of the individual or even the species as a whol
In natural, unaltered organisms, she explains, each
sequence of DNA
in a genome codes for a particular outcome, expressed as a protein that determines a quality of the individual or even the species as a whol
in a
genome codes for a particular outcome, expressed as a protein that determines a quality of the individual or even the species as a
whole.
In Hollywood terms, a marriage of blockchain, the technology created to track the bitcoin digital currency, and
whole genome sequencing is a supercouple.
Therefore, Danny Miller, an MD - PhD student at the University of Kansas Medical Center who is conducting his doctoral research
in the Hawley lab, had to rely on
whole genome sequencing and new computer algorithms to pinpoint the locations of both kinds of events.
In what was originally a separate line of investigation, David Baker and Taane Clark and colleagues at the London School of Hygiene & Tropical Medicine and the Wellcome Trust Sanger Institute analyzed the
whole -
genome sequences of two P. falciparum laboratory strains that they knew were unable to produce gametocytes.
In addition, while innovators are trying to lower the cost of
whole -
genome sequencing to less than $ 1,000, it's possible that gene patents may add to the cost.
Described
in the January 7th issue of Neuron, the technique uses «deep,» highly sensitive
whole -
genome sequencing of single neurons and a new technology that identifies inserted bits of DNA caused by retrotransposons, one of several kinds of so - called somatic mutations that can arise as the brain develops.
Therefore,
whole genome sequencing was performed on a total of 76 patient isolates, including up to two repeat isolates from patients who tested positive for MRSA
in the first screen.
Now,
in a series of recent studies, scientists at the University of Missouri are using
whole genome sequencing through the 99 Lives Cat Genome Sequencing Consortium to identify genetic variants that cause rare diseases, such as progressive retinal atrophy and Niemann - Pick type 1, a fatal disorder in domestic
genome sequencing through the 99 Lives Cat Genome Sequencing Consortium to identify genetic variants that cause rare diseases, such as progressive retinal atrophy and Niemann - Pick type 1, a fatal disorder in dome
sequencing through the 99 Lives Cat
Genome Sequencing Consortium to identify genetic variants that cause rare diseases, such as progressive retinal atrophy and Niemann - Pick type 1, a fatal disorder in domestic
Genome Sequencing Consortium to identify genetic variants that cause rare diseases, such as progressive retinal atrophy and Niemann - Pick type 1, a fatal disorder in dome
Sequencing Consortium to identify genetic variants that cause rare diseases, such as progressive retinal atrophy and Niemann - Pick type 1, a fatal disorder
in domestic cats.
Now, by
sequencing the
whole genomes of over 1,000 isolates of mycobacteria from 517 individuals attending CF specialist centres
in Europe, the US and Australia, researchers have demonstrated that the majority of CF patients have acquired transmissible forms of M. abscessus that have spread globally.
In another study representing the first time precision medicine has been applied to feline health, Lyons and her team used whole genome sequencing and the 99 Lives consortium to identify a lysosomal disorder in a 36 - week - old silver tabby kitten that was referred to the MU Veterinary Health Cente
In another study representing the first time precision medicine has been applied to feline health, Lyons and her team used
whole genome sequencing and the 99 Lives consortium to identify a lysosomal disorder
in a 36 - week - old silver tabby kitten that was referred to the MU Veterinary Health Cente
in a 36 - week - old silver tabby kitten that was referred to the MU Veterinary Health Center.
Using high - throughput
sequencing of
whole genomes will also be key
in finding other kinds of genetic variation involved
in autism, Grice explained.
Even with
whole genomes, some of the earliest branches
in Neoaves proved challenging to resolve, which was best explained by massive protein - coding
sequence convergence and high levels of incomplete lineage sorting that occurred during a rapid radiation after the Cretaceous - Paleogene mass extinction event about 66 million years ago.
Eager to get the record straight, Laurent Frantz, now a bioinformaticist at the University of Oxford
in the United Kingdom, carried out sophisticated computer analyses of 103
whole genomes sequenced from wild boars and domesticated pig breeds from all over Europe and Asia.
Using
whole -
genome sequencing, they looked at rare genetic variants
in modern - day British populations and compared them with variants
in the DNA of 10 ancient skeletons.
Whole genome sequencing of modern and ancient horses unveils the genes that have been selected by humans
in the process of domestication through the latest 5,500 years, but also reveals the cost of this domestication.
In the September issue of G3, Cuomo et al. unveil the first
whole -
genome sequence of a clinical sample of C. krusei, providing leads on genes that may be important for the species» fluconazole resistance.
This is one of the first population genomics analyses to use high - coverage
whole -
genome sequencing in pigs, each individual has been
sequenced more than 20-fold depth with the
genome coverage of 95 %.
In this study, researchers collected a Chinese alligator sample from Changxing Yinjiabian Chinese Alligator Nature Reserve (Zhejiang Province, China) and
sequenced its
genome using a
whole -
genome shotgun strategy.