Sentences with phrase «sequence data»
Sequence data refers to information or data that is arranged in a particular order or sequence. It could be a series of numbers, letters, or symbols that are organized in a specific pattern. This type of data is often found in various fields such as genetics, computer programming, and mathematics. Full definition
In contrast, analysis of sequence data from early in the outbreak indicated rapid mutation.
science.sciencemag.org
There's all this genome sequencing data from different organisms all over the world.
Experience with next - generation sequencing data is an advantage, but is not required.
These are typically determined from DNA sequence data alone based on the known genetic code and gene models.
The authors argue that the use of molecular sequence data in identifying species will likely become increasingly important and routinely applied.
As the amount of available sequence data continues to grow, he thinks he has his work cut out for him.
Further improvements to the system are likely to remove the need for short read sequence data.
In addition, more sequencing data and more comprehensive analyses are in progress.
For example, cloud - computing platforms would allow people to upload and analyse sequencing data as soon as they are available.
That genetic sequencing data revealed that specific cells substantially multiplied after the initial infection, then moved to the infection site and provided protection against the second infection.
Yet those who produce next - gen sequencing data are rapidly adopting this universal short read data format as the de facto standard.
Yet I can also tell you that they're inherently noisy — particularly for targeted sequencing data — and I would not be confident in using them to guide clinical care.
About one - third of respondents listed the field's lack of basic understanding of genome biology as one of the main obstacles to making use of sequence data today.
And «that's just sequence data,» he continues.
Thus we've formed a focus group to evaluate the different programs for sequence alignment and variant detection in next - generation sequence data.
A likelihood ratio test for species membership based on DNA sequence data.
The plan is to scale up to collecting whole - tumor genome sequence data from 3,000 to 4,000 patients annually.
No other technology allowed the flexibility and capability to manipulate large amounts of genetic sequence data.
From 2008 - 2010, he was supported by the CGGH to study phenotypic variation in the drug sensitivity of Plasmodium falciparum isolates collected Kilifi District, and to investigate genotype - phenotype associations using genome sequencing data generated on these isolates at the Wellcome Trust Sanger Institute.
In a study that included children and young adults with relapsed or refractory cancer, incorporation of integrative clinical genomic sequencing data into clinical management was feasible, revealed potentially actionable findings in nearly half of the patients, and was associated with change in treatment and family genetics counseling for a small proportion of patients, according to a study in the September 1 issue of JAMA.
Cas - Analyzer is an instant assessment tool for high - throughput sequencing data for genome edited cells.
In addition, generating sequence data with sufficient coverage will allow us to better understand the minor variants that exist as quasispecies within a population.
His primary research interests are bioinformatics, computational biology, machine learning, and integrative analysis of high throughput sequencing data with an emphasis on regulatory genomics and epigenomics.
Reported here is the de novo assembly of a eukaryotic genome using only MinION nanopore DNA sequence data by examining a novel Galdieria sulphuraria genome: strain SAG 107.79.
Our lab has a strong track record in integration of large - scale genome and transcriptome sequencing data sets to characterize the genetic architecture of variants that affect the transcriptome.
Watson School awards seven Ph.D. degrees, to students who studied topics ranging from single - cell sequence data analysis to acute myeloid leukemia...
Characterization of structural variations and chromothripsis in nanopore sequencing data of human genomes
However, the NextSeq series ™ NGS generates genome - wide sequence data as «digital data» in the resolution of single nucleotide and has no specificity, discrimination and sensitivity issues.
I developed algorithms for detecting genetic variation from large scale sequencing data as a member of the 1000 Genomes Project Consortium.
It will take over for NIH's National Center for Biotechnology Information, which had been collecting cancer sequencing data through last August.
Using an unsupervised learning algorithm, the team was able to convert the T - cell receptor sequencing data into numeric distances based on similarities in the receptor sequences and cluster them by functional specificity.
Weeding out false - positives is one of the greatest challenges facing those of us who analyze massively parallel sequencing data.
To annotate the genome, the team generated transcriptome sequence data — which can be used to measure gene expression based on RNA levels — in 12 different tissues types.
Chiu and his team plan to introduce a graphical user interface that will allow small laboratories to analyze and access ultra-rapid, deep - sequencing data through cloud computing over the Internet, even though they do not have access to advanced computers.
These data — available openly to the global scientific community via NCBI GenBank, along with corresponding sample data — more than doubles the mumps clinical sequence data available to the public.
Assembling the 20 Gb white spruce (Picea glauca) genome from whole - genome shotgun sequencing data.